| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4481 |
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| Symbol | |
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| ID | 5060971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 5071698 |
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| End bp | 5072609 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640476748 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001161287 |
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| Protein GI | 145596990 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.46562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0126709 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAAT CACCACCGAC TACCCCGGTC TGCTACCGCC ACCCCGGCCG GGAGGCCTAT
ATCCGGTGCA ACCGCTGCGA CCGGGTCATC TGCCCGGACT GCATGCGCGA GGCCTCGGTG
GGCTTCCAGT GCCCGGAGTG CGTCAACGAA GGGCGCCGCA GCGTGCGGCC GGCACGTACC
GCCTTCGGGG GTGGTCTCGC CGGCCAACAC GGCTATGTCA CCAAGGCGTT GATCGCGTTC
AACGCCCTGG TGATGCTGCT TTCCATCAGC ACCGACCGGG GCGGCGACGC GGCGGTGGGG
GGCTCCGGCC TCGGCGGCCT CCTCGGCGGC ACCACCCCGC TGACCGAGTG GGGAGCGGTG
CTCGGGCTTG CGGTCTTTCC CGACGGCACC GTGGGGGGCA TCGCCGATGG CCAGTGGTAC
CGCCTGGTCA CCGCGATGTT CCTGCACTAC GGCGTGATCC ACCTACTGCT GAACATGTAC
GCGTTGTGGA TCCTCGGTCG AACCCTGGAG GCGAGTCTCG GCCCGGCCCG GTTCCTGGCC
CTCTACCTGG TCGCTGGCCT CGGCGGGAAT GTCGCGGCCT ACCTGATCAG CGCACCGAAC
GCGGCCACCG CGGGCGCGTC GACGGCCATC TTCGGGCTCT TCGCGGCCCT GTTCGTCGTC
GGCCGGCGAA TGGGGCGGGA CGTCTCCCAG GTCCTCCCGA TCTTGGTGAT CAACCTGGTC
TTCACGTTGA CCGTACCGGG GATCTCGATC CCCGGTCACC TGGGCGGTCT CGCGGTCGGC
GGCCTGATGG CCTTCGTCCT CGCCTACGCC CCGCGGTCAC GGCGCACGTT GGTGCAGGTG
GCCGGTGGGG GTGTGCTCGT GGTGGCGCTG CTCGGCCTCG CCCTGATCCG GACCGCGGCC
CTGCTCGCCT GA
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| Protein sequence | MSESPPTTPV CYRHPGREAY IRCNRCDRVI CPDCMREASV GFQCPECVNE GRRSVRPART
AFGGGLAGQH GYVTKALIAF NALVMLLSIS TDRGGDAAVG GSGLGGLLGG TTPLTEWGAV
LGLAVFPDGT VGGIADGQWY RLVTAMFLHY GVIHLLLNMY ALWILGRTLE ASLGPARFLA
LYLVAGLGGN VAAYLISAPN AATAGASTAI FGLFAALFVV GRRMGRDVSQ VLPILVINLV
FTLTVPGISI PGHLGGLAVG GLMAFVLAYA PRSRRTLVQV AGGGVLVVAL LGLALIRTAA
LLA
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