Gene Strop_4466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4466 
Symbol 
ID5060955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp5058088 
End bp5059050 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content67% 
IMG OID640476732 
Productalpha/beta hydrolase domain-containing protein 
Protein accessionYP_001161272 
Protein GI145596975 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0674396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGGCA AGGCTCCACT GGGCACCCGA ATCCTCAGGG ACACCCAGGA CTGGTCGGCT 
ATGACCGACG ATCAAGTGAT CGCCGCGCGA AAGAAGGCCA ACCACGTGGC ATCGTCTCGT
GCCGCGCGAA TCATCACCGG CCTGCCGGAC CGCCGCGCGC GAATCGAGGA AACCTCGGTC
GATCTTCCAG GTCGCCGTCT GATGCTGCGG GTACACCGTC CGAAGGACAC GAGCCGACGC
CTGCCGCTGG TCGTCTCATT CCATGGCGGA GGCTTCTTCG CGGGCACCGC CGCGCAGAAC
GACTGGCTCA ACAGCAACCT TGCGGCCCGG TGCCCGGCAG TGGTCGTCTC GGTGGAGTAT
CGCCTCGCCC CGGAGCACCA GCTGCCCCAG CCGATCAACG ACGGCTACGA CACCGTGGTC
CGGCTCGTTG ACGACAGTAC CCATTGGGGC ATCGACCCCG CAGCCGTCGC GGTCATGGGC
GAGAGCGCGG GTGGCACGAT CGCCGCACTT GTCGCCTTGC GTGCCCGTAA GGAGGGCCCG
CCGCTGCGCG CGCAGGCGCT GATCTACCCG GGCACGGACT GGACCGAGAG CATGACCAAG
TACTCCTCCA TCACGGAGAA TGCCGACAAC CCCACTCTCT CGGCGTCCCG GCTGCGCGCA
ACCCGCACGT TGAGCGTGCC ACCTGCCCTC GACCCGCGCA GTGTGTCACC CGTCAAGTTC
GAGAACCTCG CCGGACTACC ACCCACACTG ATCGTCACAG CCGCGCTGGA TCCGCTGGCC
GACCAGGGGC ACCACTATGC CGAGCGGCTT CGCAAGGACG GCACCGACAC CCGTTTGACC
TGCTACCCGA GGGCCACCCA CACATTCCTG AGCACTCCGG GCGTGGTGCC GGCCGCCCGG
CCAGCGCGCC GCGAGATAGT CGCCTTCCTG CGCAGCCATC TCCATCCGGC GTCGCGAAGC
TGA
 
Protein sequence
MRGKAPLGTR ILRDTQDWSA MTDDQVIAAR KKANHVASSR AARIITGLPD RRARIEETSV 
DLPGRRLMLR VHRPKDTSRR LPLVVSFHGG GFFAGTAAQN DWLNSNLAAR CPAVVVSVEY
RLAPEHQLPQ PINDGYDTVV RLVDDSTHWG IDPAAVAVMG ESAGGTIAAL VALRARKEGP
PLRAQALIYP GTDWTESMTK YSSITENADN PTLSASRLRA TRTLSVPPAL DPRSVSPVKF
ENLAGLPPTL IVTAALDPLA DQGHHYAERL RKDGTDTRLT CYPRATHTFL STPGVVPAAR
PARREIVAFL RSHLHPASRS