Gene Strop_4448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4448 
Symbol 
ID5060937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand+ 
Start bp5044682 
End bp5045311 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content73% 
IMG OID640476714 
Productcob(II)yrinic acid a,c-diamide reductase 
Protein accessionYP_001161254 
Protein GI145596957 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID[TIGR02476] cob(II)yrinic acid a,c-diamide reductase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.178194 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTGT ACGACGTCAT CCACCGCCGC CGGGACGTGC GGGCGCAGTT CACCGGGGCG 
CCGGTGCCCA CGGAGACCCT GGACCGGGTG CTCGCCGCCG CCCACGCGGC GCCAAGCGTC 
GGGTACTCGC AGCCGTGGGA CTTCATCCTG GTCCGCGACC CGGAGTTGCG CCGGGCCTTC 
CACGAGCACG TCAGCGCCGA GCGGAAGGTC TTCGCCGCGA CGCTGACCGG GGAGGCCGCC 
GAAAGATTCG CCGGCATCAA GATCGACGGG GTGCTGGAGT CCAGCCTGTC GGTCGTCGTC 
ACCTACGACC CGACCCGGGG CGGGCCGGCG GTCCTCGGCC GGCACGCCAT CGCCGACACC 
GGGCTCTACT CGGCCTGCCT GGCCATCCAG AACCTCTGGC TCGCCGCGAC CGCCGAGGGA 
CTCGGCGTCG GCTGGGTGTC GTTCTACCGG GAGGGGTGGC TCGCCGAGCT GCTCCGGATC 
CCGGCCGGGA TCCGTCCGGT GGCCTGGCTC TGCCTCGGCC CGGTCACCCA CTTCGAGGCG 
GTACCTGACC TGGCCCGGCA CGGCTGGCGA AGCAAGCGCC CGCTGACCGA GGCCGTGCAC 
ACCGACCGCT GGGGCAGCGC ACCCACATAG
 
Protein sequence
MDLYDVIHRR RDVRAQFTGA PVPTETLDRV LAAAHAAPSV GYSQPWDFIL VRDPELRRAF 
HEHVSAERKV FAATLTGEAA ERFAGIKIDG VLESSLSVVV TYDPTRGGPA VLGRHAIADT 
GLYSACLAIQ NLWLAATAEG LGVGWVSFYR EGWLAELLRI PAGIRPVAWL CLGPVTHFEA 
VPDLARHGWR SKRPLTEAVH TDRWGSAPT