| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4443 |
|---|
| Symbol | |
|---|
| ID | 5060932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 5037832 |
|---|
| End bp | 5039226 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640476709 |
|---|
| Product | MmgE/PrpD family protein |
|---|
| Protein accession | YP_001161249 |
|---|
| Protein GI | 145596952 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.945637 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGTG CGACACCGAC CGATCCGGAC GGGCCGACCG GTCGGCTCGC CACCTGGCTG
ACGGAGACCG CGACCGACGC CATCCCGGCC GATGTCACCA CCCGAGCCCG ACACCTGATC
CTGGACGGCG TCGGATGCCT CCTGGTCGGC GCCCGACTGC CCTGGTCCCG GATCGCCGTA
CGGAGCCTGA CCGTCGAACC GGGCTCAGGC GTCGTCGCCG GCTGGGACCG CACCGCCGAC
GCCGCGACGG CAGTGCTGCT GAACAGCAGT TTCATTCAGG GCTTCGAGCT CGACGACGTG
TCGTACCAGA TTCCCTGGCA CGCCAACGCG GTGTTGCTGC CGGTGCTGCT GGCCGTGGCC
GGCCGGCGCG GGGAGGTCAC CGGGGCGGAG TTCCTCCGGG CCGAGGTACT GGGCGTCGAG
ACCGGTGCCC GGGTGGGCCT CGCGCTGGGC GGACCACAGC TGGTGAGACA GGGCTGGCAC
TCGGGTGCGG TCTTCGGTGG TCCCGCAGCG GCAGCCGCCG GCGGAGTACT GCTCGACCTC
ACCCCCGCCC AGTTCGAGGA CGCGTTGGGC ATCGCCGCGA CCCAGTCGTG CGGGTTGATG
GCCAACGAAG CGATGGTCAA GCGCATGCAG CACGGCTTCG CCGCACGCAA CGGCCTGGTC
GCGGCAATGC TGGCCGCCGG CGGCTACATC GGGACCAAGC GGATCTTTGA ACGCGGATAC
GGCGGCTACC TCACGGTCTA CGGATCCGGA CACGACACCG ACCCGTCCCG GATCGACGAC
GCGCTGGGCG AGCACTGGTA CCTGCGGGAG CAGACGATCA AACCGTACGC GGCGATGGGG
TACACCCATC CGGCGATCGA CGCCGCGCTG GCCCTGCGGG CGGCGAACCG GTTCGATCCC
ACCGCCACCG AACGGATCGA AGTCGAAGTC GCGGAGTCCG TCTTCGATCA CACGGCGTTC
CCGATCCATC GACCGATCGA GAGCGTCGCC GCGCAGATGT CCGTTCGCTA CGTGACGGCG
GCGGCCCTCC TCGACGGTAC GGTGTCGCTG GAACAACTCC GACCGGACCA GCTGGACCGG
GACGACGTGT GGCGGCTGGT TGACCGGACG ACCGTGACCC GCGGGTCCGG GTCGGCGTCT
CAGGGCCGGG TACGCCTGAC CGATGTCGAT GGTCGGACCC ACGAGCACCA CACCGACGCG
CCGCTCGGCT CAGTCGAGCG TCCACTCGAC GATGCCGCCA TCGTGGACAA GTATCGGGAC
CTGACCGACC GGATCATCGA CCGGCGCCGG CAGCGGACGA TCGAGGATCT CGTGCTGCAC
CTGGACGAGC ACCGGGACGG CCCGGCGGCG CTGCTCGCGC TACTCGCCCC AGCGGTCGGC
GACGCACTGG ACTGA
|
|---|
| Protein sequence | MAGATPTDPD GPTGRLATWL TETATDAIPA DVTTRARHLI LDGVGCLLVG ARLPWSRIAV
RSLTVEPGSG VVAGWDRTAD AATAVLLNSS FIQGFELDDV SYQIPWHANA VLLPVLLAVA
GRRGEVTGAE FLRAEVLGVE TGARVGLALG GPQLVRQGWH SGAVFGGPAA AAAGGVLLDL
TPAQFEDALG IAATQSCGLM ANEAMVKRMQ HGFAARNGLV AAMLAAGGYI GTKRIFERGY
GGYLTVYGSG HDTDPSRIDD ALGEHWYLRE QTIKPYAAMG YTHPAIDAAL ALRAANRFDP
TATERIEVEV AESVFDHTAF PIHRPIESVA AQMSVRYVTA AALLDGTVSL EQLRPDQLDR
DDVWRLVDRT TVTRGSGSAS QGRVRLTDVD GRTHEHHTDA PLGSVERPLD DAAIVDKYRD
LTDRIIDRRR QRTIEDLVLH LDEHRDGPAA LLALLAPAVG DALD
|
|---|
| |