| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4439 |
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| Symbol | |
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| ID | 5060928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 5032726 |
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| End bp | 5034204 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640476705 |
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| Product | phytoene dehydrogenase-related protein |
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| Protein accession | YP_001161245 |
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| Protein GI | 145596948 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.93912 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCACTG TGCGCGGACG TACGGATCGG GTCGTGGTCG TCGGTGCCGG GCTCGGCGGG
CTGGCCTGCG CGCTGCACCT GGCGGGCAGC GGTCGCCAGG TGACAGTGCT GGAACGTGAG
CCGGTGCCGG GTGGTCGGGC CGGCCGACTC AGCGTCGACG GGTACGAGTT CGACACCGGT
CCCACGGTGC TGACCATGCC GGAGCTGATC GCCGAGGCGC TCCACGCCGT TGGCGAGGAA
CTCGACGACT GGCTCGAACT GACCCCCCTC GACCCCGCCT ACCGGGCGTA CTATCCGGAT
GGCTCCACTC TGGACGTGAT CACCGACACG ACCCGGATGG CCGCCGAGAT CGCGAAGGTC
TGTGGCCCCC GAGAGGCCGA CGGCTACCTC CGTTTCGTCG ACTACGCCCG GGAGCTGTGG
CGGCTCGAGC GGGCCGACTT CATCGAACGC AACCTGGACG CACCCACTGA CCTGCTCACC
GGGAACCTGC TGAAACTCCT CGCCGGTGGT GCCTTCCGGC GGCTCCAAAC GAAGATCAAC
CAGTTCTTCC GGGACCCGCG TACCCAGCGC GTCTTTTCCT TCCAGGCGAT GTATGCCGGG
CTCGCACCGC ACGACGCGCT CGCCATCTAC GCGGTTATCG CGTACCTCGA CTCCGTCGCG
GGGGTGCACT TCCCGCGCGG CGGCATCCAC GCCGTCTCGC GGGCCATGGC CGGCGCCGCC
GAGAAGCACG GGGTGCAGTT CCGGTACGAC ACCACCGTTA CCCAGGTGGA GACCGCCGCC
GACCGGGCAA CCGGTGTCCG GACCGCCAGC GGGGAGTTCG TCCCCGCCGA CGTGGTGGTG
CTCAACCCGG ATCTGCCGGT GGCCCACCGA GAACTGCTCC AGACCCGGCA CCGTCGGTTG
ACCTACTCCC CCTCCTGCGT GGTCCTCCAC ATCGGGTCAG CGCAGGGCTA TGAGAAGATC
GCTCACCACA ACATCCATTT TGGGCGCGCG TGGCGGGGCA CGTTCGACGA GGTCATCCGC
CGGGGCGAAC TGATGAGCGA CCCGTCGCTG CTGGTGACCA ACCCGAGCCG GACCGACCCG
TCGGTAGCTC CCGCCGACCG GCACGCGTAC TACGTGCTGG CGCCGGTGCC GAACCTGGAC
CGCGCGCCGT TCGACTGGCG GGGCGGCCTG GCCGCCCGCT ACGCCGACCG GCTGGTGCGA
ACGCTGGAGG AGCGCGGCTA CGTGGGCTTC GGAGACGGCA TCGAGGTGCT GCGGACGATC
ACGCCTGCCG AGTGGGCGGA GCAGGGCATG GCCGCGGGTA CGCCGTTCGC CTCCGCACAC
AGCCTCCTCC AGACCGGGCC GTTCCGCCCG CCCACCCTGC ACCGCGGACT CGCGAACGTG
GTCTTCGTCG GCTCGGGCAC CCAGCCCGGA GTCGGGGTGC CGATGGTGCT GATCTCCGGC
AAGCTCGCCG CCGCTCGGGT GACGGGAGCC CCTTCGTGA
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| Protein sequence | MRTVRGRTDR VVVVGAGLGG LACALHLAGS GRQVTVLERE PVPGGRAGRL SVDGYEFDTG
PTVLTMPELI AEALHAVGEE LDDWLELTPL DPAYRAYYPD GSTLDVITDT TRMAAEIAKV
CGPREADGYL RFVDYARELW RLERADFIER NLDAPTDLLT GNLLKLLAGG AFRRLQTKIN
QFFRDPRTQR VFSFQAMYAG LAPHDALAIY AVIAYLDSVA GVHFPRGGIH AVSRAMAGAA
EKHGVQFRYD TTVTQVETAA DRATGVRTAS GEFVPADVVV LNPDLPVAHR ELLQTRHRRL
TYSPSCVVLH IGSAQGYEKI AHHNIHFGRA WRGTFDEVIR RGELMSDPSL LVTNPSRTDP
SVAPADRHAY YVLAPVPNLD RAPFDWRGGL AARYADRLVR TLEERGYVGF GDGIEVLRTI
TPAEWAEQGM AAGTPFASAH SLLQTGPFRP PTLHRGLANV VFVGSGTQPG VGVPMVLISG
KLAAARVTGA PS
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