| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4438 |
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| Symbol | |
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| ID | 5060927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 5032130 |
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| End bp | 5032729 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640476704 |
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| Product | isopentenyl-diphosphate delta-isomerase |
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| Protein accession | YP_001161244 |
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| Protein GI | 145596947 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1443] Isopentenyldiphosphate isomerase |
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| TIGRFAM ID | [TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGGCC GGGAAGCCCA CCTGGTCGAG CTGGTGGACG AGGCCGGGAC GGCGACCGGG
TACACCACCG TGCGCGCCGC GCACCAGCCG CCGGGGCGGT TGCACCGCGC CTTCTCGGTG
CTGCTCGTCG ACCCCGATGG CCGGGTCCTG CTCCAGCGCC GGGCCGAGGT GAAGACCCGC
TTTCCGCTGC GCTGGGCCAA CACCTGCTGC GGCCACCCAT TGCCCGGCGA GCCGCTCACG
ATCGCCGCCA ACCGCCGGCT CGGAGAGGAG TTGGGGGCCG CCCCGGTCGA GCTGACCGAG
GTCGGCGTCT ACGTCTACCG CGCCGAGGAC CCGGCCACCG GCAGGGTCGA GTTCGAGTAC
GACCACGTCC TCCGCGGCGA CCTGCCGGCC CACGCGCCGC TGCGCCCGGA TCCGGACGAG
GTCGCCGAGC TGCGCTGGGT GCCCCCCTCC GAACTGACGG CGGAGCTCGA CGCCGACCCG
CACGCGTACG CCCCGTGGTT GGGCGGGGTG GTCGACCGGC TGTATCACCC GGGTGAGCCC
GCCCTGCTCC AGTCGACGCT GGCGGCCGAG AATGCTCCGG AGCGGTCAGG TGGCGGATGA
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| Protein sequence | MTGREAHLVE LVDEAGTATG YTTVRAAHQP PGRLHRAFSV LLVDPDGRVL LQRRAEVKTR
FPLRWANTCC GHPLPGEPLT IAANRRLGEE LGAAPVELTE VGVYVYRAED PATGRVEFEY
DHVLRGDLPA HAPLRPDPDE VAELRWVPPS ELTAELDADP HAYAPWLGGV VDRLYHPGEP
ALLQSTLAAE NAPERSGGG
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