Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4432 |
Symbol | |
ID | 5060918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 5026494 |
End bp | 5027753 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640476695 |
Product | major facilitator transporter |
Protein accession | YP_001161238 |
Protein GI | 145596941 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGCTA TGTTCGCTGC CATGTTTGAA CCTCTGCGGG CGGCGCGGCT GGCCACCTTC ACCTACTTCA CCCTCAACGG CTTCGTCCTG GGGGCCTGGA TCGTCCACAT CCCCGCCGTC GAACACCGAG CCGACATCAG CCACGCCACG CTCGGCTGGC TCCTGCTGCT CCTCGGTGCT GGCGCCTTCG CCGGGATGCA CGTCGTGGGG CCGCTCACCG ATCGCTTCGG CGCTCGTCGG GTTGTCCCGC TGAGTGCGGT GCTGTGCAGC ACGACGCTCG TCCTACCCGC GTTCGCCGAA AGCGCCGGGA CGCTGGGCCT GGCACTACTG GTCTTCGGCA TCGGCAACGG CAGCCTGGAC GTCAGCATGA ACACCCACGC GGTTCAGGTC GAAGCCGGAT ACAAACGCCC GGTTATGTCC GCTTTTCACG CTATGTTCTC CGTCGGCGGC GTCCTCGCCG CACTGGTCGG CGCCCGGACC CTCAGCTGGG GCTGGAGCCC GACAACCACG CTGACCATGG TCAGCCTCCT CGGCCTGACG GTCACCGCGG TCGTCGCACC CGCGCTACTG CCGCGGTTGG CGACCACCCG TACGCCAACC CCCGCCAGTG CCACCAAGAG CCGCCGGGCC AGCATCTCCC CGCGCATCTG GGCACTCGCC GGACTCGCGC TGATCCTGAT GCTCACCGAG GGCGTCGCCA ACGACTGGAG TGCACTGGCC ATGCGCGATG CGCTCGACGC GCCCGCCGCC ACCGCCGCGC TCGCCTACGG CGCCTTCGCC ACCGCGATGA CGGTTGGACG GTTCCTCACC GACGGCATCG CCGCACGCTT CGGCCCGGTA GCAATCGTCC GCTACGGCTG CGCGCTGGCC GCGCTCGCCC TCACCACCAT CGCGCTCGCA CCATCCATCT CACTCGCTCT CGTCGGATGG GCGCTACTCG GAGTCGGTCT GTCCGGCGCC GTCCCGCAGC TCTTCAGCGC GGCCGGCCAC ACCGACCCCG ACGCCGCCGG CACCAACGTC TCCCGCGTCG CGGGCCTCGG CTACCTGGGC ATGCTCAGCG GGCCCGCCAT CATCGGGCCC CTCACCCAGC TCATGCCCCT GAACTACACG TTCATCCTGC CTGCGTTCCT CTGCCTGGTC GCCGCCCTCA CGGCCCACAT CCTTCGCCCC CGGGAGGAAG CGCCGCGGCT CGAGGTCAAG GTTCCGCAGC CGGTCACCGC ACGATCAGCA GAGACTGGGC ACGGGGCAGA GCAGGACTGA
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Protein sequence | MFAMFAAMFE PLRAARLATF TYFTLNGFVL GAWIVHIPAV EHRADISHAT LGWLLLLLGA GAFAGMHVVG PLTDRFGARR VVPLSAVLCS TTLVLPAFAE SAGTLGLALL VFGIGNGSLD VSMNTHAVQV EAGYKRPVMS AFHAMFSVGG VLAALVGART LSWGWSPTTT LTMVSLLGLT VTAVVAPALL PRLATTRTPT PASATKSRRA SISPRIWALA GLALILMLTE GVANDWSALA MRDALDAPAA TAALAYGAFA TAMTVGRFLT DGIAARFGPV AIVRYGCALA ALALTTIALA PSISLALVGW ALLGVGLSGA VPQLFSAAGH TDPDAAGTNV SRVAGLGYLG MLSGPAIIGP LTQLMPLNYT FILPAFLCLV AALTAHILRP REEAPRLEVK VPQPVTARSA ETGHGAEQD
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