| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4424 |
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| Symbol | |
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| ID | 5060910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 5017208 |
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| End bp | 5019337 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640476687 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001161230 |
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| Protein GI | 145596933 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2730] Endoglucanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACGCC TGTTCCAGGC GCTGACCGTA CTCGCGGTCA CTGCCACCGC CGCGCTCGTC
GCCGCAGCGC CGGCACAAGC CGCGACGATC TGCGAGCAGT ACGGCACCAC CACCATCCAG
GACAAGTACA TCGTCCAGAA CAACCGCTGG GGCAGCGCCG CCGAGCAGTG CATCGAAACC
ACCAACAGTG GCTTCCGCAT CACCTCGCAG CAGGGATCCA CCTCCACCTC CGGGCCGCCG
CTCTCCTACC CGTCGGTGGT GCTCGGATGT CACTACCAGA ACTGCTCACC CGGGACCAAC
CTGCCGGCAC AACTCAGGCA GGTCAGCAGC GTTCCGTCCA CAATCAGCTA CGGGTACGCG
GGCGGCACCT ACAACGCCAC GTACGACATC TGGATGGACC CGACTCCGAA GACCGACGGA
GTGAGCCAGA TGGAAATCAT GATCTGGTTC CACCGACAGG GCTCGATCCA GCCGATCGGC
GGCCCGGTCG GCAACACCTC GGTGGGGGGT CGTAACTGGG AGGTCTGGCA GGGCAACAAC
GGCGGCAACG ACGTGGTCTC CTACCTCGCA CCGGCGACCA TCAACAGCTG GTCGTTCAAT
GTCAAGGACT TCATCGACGA CGTCGTCGCG CGCACCCAGG TCACCAACGA CTGGTACCTG
ACCAGCCTCC AGGCCGGCTT CGAACCGTGG AACGGGGGCG TCGGGCTGGC CGTCGACAAC
TTCTCCGCTG ATGTGAACGT CGGAACGAAC CCACCACCAC CGCCGGGCGA CGGCGGCACG
ATCGTCGGCC AGGACAGCGG ACGGTGCCTG GACATCCTGG ACCTCGGCAC CGCCGACGGT
ACCCCGATCC AGCTCTGGGA CTGCACGGCG AACTGGAACC AGCTCTGGAA CCGCACCGGC
AACACCTTCG TCAACCCACA GACCGGTAAG TGCCTCGACG TCTCCGGCGG GTCCACCGCC
AACGGTGCCC GGGTGCAGCT CTACACCTGC AACGGCACCG GAGCCCAGAA CTGGCAGGTC
AACGGCGACG GCACCATCAC CAACCCGCAG TCGGGCAAGT GCCTTGACGC GGTGGAGCTG
GGAACCAGCA ACGGCACCCG GATCCAGATC TGGGAATGCT TCGGCGGCGG CGGCACCCAG
CCCAACCAGG TCTGGACGGT CGACGGCGGC ACCACGCCAC CGGGTGGCGA CCAGACCCCG
CTGGCGGCCA ACGGACAGCT GTACGTCTGC GGTGTGAACC TGTGCAACCA GCACAACCAG
CCGATCCAGC TGCGCGGCAT GAGCACCCAC GGCCTGCAGT GGTTCAACAA CTGCTACAAC
GACGCCGCAC TCAACGTACT GGCCGACGAG TGGAAAGCTG ACCTGTTCCG CATCGCCATG
TACGTGCAGG AGGGGGGCTA CGAGACCAAC CCACCGTGGT TCACCAACCG GGTCAACGAA
CTCGTTGACG AGGCTGAGGA GCGCGGCCTC TACGCCATGA TCGACTTTCA CACGCTGACG
CCGGGCGACC CGATGTACAA CCTCGAACGG GCGAAGACCT TCTTCGCCGC CGTCGCTTCA
CGCAACGCCG ACAAGAAACA CGTCATCTAC GAGATCGCCA ACGAGCCCAA CGGGGTCGGC
TGGGGCACCA TCAAGAGCTA CGCCGAGCAG GTCATCCCGG TGATCCGGGC CAACGATCCG
GACGCCGTGG TCATCGTCGG CACCCGCGGC TGGTCCTCTC TCGGCGTCTC CGAGGGAGCC
AACGCCGACG AGGTCATCAA CAATCCGGTC AACGCCAGCA ACATCATGTA CGCGTTCCAC
TTCTACGCCG CGTCCCACAA GGACTTCTAC CGAGCCGAGG TGCAGCGTGC GGCGGCGACG
TTGCCACTGT TCGTCACCGA GTTCGGCACC GTCGACTACA CCGGTGATGG TGGCGTCGAC
GTGGGCAGCA CCAACGCCTG GATCGACCTG CTCGACCAGC TGAAGATCGG CTACGCGAAC
TGGACCTACT CCGATGCCAA CGAGGGCAGT GGAGCATTCC AGTCTGGGAC CTGCAACAGC
GGCACCTTCT CCGGGACATC GAACCTCACC GTCTCCGGCA ATCTCCTCCG CAGCCGGATC
AGCACCCCCG ACAACTTCCC GACGAGTTGA
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| Protein sequence | MRRLFQALTV LAVTATAALV AAAPAQAATI CEQYGTTTIQ DKYIVQNNRW GSAAEQCIET
TNSGFRITSQ QGSTSTSGPP LSYPSVVLGC HYQNCSPGTN LPAQLRQVSS VPSTISYGYA
GGTYNATYDI WMDPTPKTDG VSQMEIMIWF HRQGSIQPIG GPVGNTSVGG RNWEVWQGNN
GGNDVVSYLA PATINSWSFN VKDFIDDVVA RTQVTNDWYL TSLQAGFEPW NGGVGLAVDN
FSADVNVGTN PPPPPGDGGT IVGQDSGRCL DILDLGTADG TPIQLWDCTA NWNQLWNRTG
NTFVNPQTGK CLDVSGGSTA NGARVQLYTC NGTGAQNWQV NGDGTITNPQ SGKCLDAVEL
GTSNGTRIQI WECFGGGGTQ PNQVWTVDGG TTPPGGDQTP LAANGQLYVC GVNLCNQHNQ
PIQLRGMSTH GLQWFNNCYN DAALNVLADE WKADLFRIAM YVQEGGYETN PPWFTNRVNE
LVDEAEERGL YAMIDFHTLT PGDPMYNLER AKTFFAAVAS RNADKKHVIY EIANEPNGVG
WGTIKSYAEQ VIPVIRANDP DAVVIVGTRG WSSLGVSEGA NADEVINNPV NASNIMYAFH
FYAASHKDFY RAEVQRAAAT LPLFVTEFGT VDYTGDGGVD VGSTNAWIDL LDQLKIGYAN
WTYSDANEGS GAFQSGTCNS GTFSGTSNLT VSGNLLRSRI STPDNFPTS
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