| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4413 |
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| Symbol | |
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| ID | 5060899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4994870 |
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| End bp | 4996162 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640476676 |
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| Product | hypothetical protein |
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| Protein accession | YP_001161219 |
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| Protein GI | 145596922 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4632] Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.788807 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGACGA ACAGGAACCG GTGTAAGCAG CCGCGACGCC GCACGACCAC TGTGGTGACA
GCGCTGCTCG GAGCTGCCCT GCTTGGATTT ACCGCCACCC CCATGCCGGT GTCGGCGAAC
GAGGCAACCC TGCCCCTCGG CGACTCCGAC CTGGTGGAGA CTCGCAGCAG CGAGACGCTC
GCCCAGGGCG TCACGCTGAC CCGGATCGTC CGCGGCACCG AGCCCGCACC GATCGATCAG
ATCGGCGACA CTCCCCGTGG CCCTTGGGTG GTCAATGTCC TGACGATCGA CCCCACGCAG
AGCAAGGGGC ACCTCGCCGC CACCTACGGA CCGGACCTGG CCGGAGTCGA AAAGACCACC
GACCTCGTCC GCGAGGCTGA CGCGCTGGTC GGGGTCAACG CCTCCTTCTT CACCTTCACC
GCCAGCGCCG AGTACCCCGG CGACCCTGTT GGCCTGGGGA TATACGGCGG GCGGCTCCTC
AGCGAGCCCA CCGGTGACGC CGCGGAGGCA GACCTGGTCC TCGATGCCAA GAACCACAAG
GTGCTCATGG GCCAGTTGCG GTGGACCGGT AGCGTCCGAA ACGCCCAGAC CAAGATCAGC
CTTCCACTGG AGTACATCAA CCACCCGCCG GTTGTCCCGG ACCCCTGCAC TGATCTTCCA
GACCCGACCC AGTGCGCCGA CTCCGGCGAC ACGGTGCGAT TCACGCCGGA GTTCGCCGCC
AGCACGCCGT CCGGGCCGGG CGTCGAGGTC GTCCTCGACA GCAAGGGCTG TGTGGTCCGG
ACCACGACCA CCCGCGGTAC GACTCTCGCC CAGGACCAGA CCTCCCTACA GGCGACCGGG
CGGGAAGCGG CGGATCTGCT CGCCGTGGCG CAGGGCTGCG TGAAGCACTC CAGCTCCCTG
CAGGACGAGG CGGGTAAGAA GATTCCGCTG CGCCCCGGGA CGTTCGCCGT GAACGGCCGC
TACCGGCTGG TGAAGGACGG GCAGATCGTC GCGCCATCCG GCTCGGACAG CTTCTTCGAT
CGCCACCCGC GCACCATCGC CGGAACCACC CTCGACGGCA AGATTGTGCT CGTGACCATC
GATGGCCGGC AGACCACCAG CGTTGGCACC ACCATGACCG AGACCGCCTC GGTCGCCGCC
GCACTCGGCA TGCACGACGC GGTCAATCTG GATGGCGGTG GATCAACCAC AATGTCGGTC
GAAGGCTCCC TGGTCAACCA GCCGAGCGGC AACGAGGAGC GGCCCGTCGG CGACGCGCTC
GTCTACATCG ATCGCACGTT CGACGATCGC TGA
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| Protein sequence | MTTNRNRCKQ PRRRTTTVVT ALLGAALLGF TATPMPVSAN EATLPLGDSD LVETRSSETL
AQGVTLTRIV RGTEPAPIDQ IGDTPRGPWV VNVLTIDPTQ SKGHLAATYG PDLAGVEKTT
DLVREADALV GVNASFFTFT ASAEYPGDPV GLGIYGGRLL SEPTGDAAEA DLVLDAKNHK
VLMGQLRWTG SVRNAQTKIS LPLEYINHPP VVPDPCTDLP DPTQCADSGD TVRFTPEFAA
STPSGPGVEV VLDSKGCVVR TTTTRGTTLA QDQTSLQATG REAADLLAVA QGCVKHSSSL
QDEAGKKIPL RPGTFAVNGR YRLVKDGQIV APSGSDSFFD RHPRTIAGTT LDGKIVLVTI
DGRQTTSVGT TMTETASVAA ALGMHDAVNL DGGGSTTMSV EGSLVNQPSG NEERPVGDAL
VYIDRTFDDR
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