Gene Strop_4408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4408 
Symbol 
ID5060894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4988149 
End bp4988814 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content71% 
IMG OID640476671 
Producthypothetical protein 
Protein accessionYP_001161214 
Protein GI145596917 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCCGG CAATCGCCCT TCTCCCCAGC GCACTGCTCG GACCCGCCGT CTGGCGGCCG 
GTCCGGGAGC AACTCCGCAC CATCGGCCGG GACGCCATCG TCGCTGGAGC GCAGGAAGCG
AGCGGAACCT CCGTGGACGA CGTCCTGCGG TGGTACCTGG ACAGCCTGCC CACCGGCCGC
GACTACGTGC TCGTGCCACA CAGCAACGCT GGCCTGTACG TGCCGGCCAT CACCGCACGG
CGCTCGGTGA CCGGGCTCGT CTTCGTGGAC GCGATCCTCC CGCCCCGGCG GGGAACCGTT
CCAGTGGCGC CTCCGGGCCT ACAGGAAGTG CTGCACGCCC TCGCCGGGCC GGACGGCGTA
CTGCCGGTCT GGACCTCCTG GTGGCCCCCG GAGGAGATCG CCGCCCTCTT CCCATCCGAG
CAGGTCAGAG CGGAGGTGTC CGCCCAGCAA CAGCGCTTTC CGCTCGCCTA CTTCGCACAG
CAGGTAGCCA TCGCCCCCGG CTGGTCCGAC CGTCCCGCCG GCTATCTCGC CTTCGGTGAT
GCGTACGCAG CCGAGCGGGT CAGGGCTGAG GGCTGGGGCT GGCGCTCGAC GCGGATCGAC
GGCGGACACC TGCACATGCT GAACGCACCG GGTGAGGTCG CCGCCGCCGT CGCGCGCTCG
CTCTGA
 
Protein sequence
MDPAIALLPS ALLGPAVWRP VREQLRTIGR DAIVAGAQEA SGTSVDDVLR WYLDSLPTGR 
DYVLVPHSNA GLYVPAITAR RSVTGLVFVD AILPPRRGTV PVAPPGLQEV LHALAGPDGV
LPVWTSWWPP EEIAALFPSE QVRAEVSAQQ QRFPLAYFAQ QVAIAPGWSD RPAGYLAFGD
AYAAERVRAE GWGWRSTRID GGHLHMLNAP GEVAAAVARS L