Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4403 |
Symbol | |
ID | 5060889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4980933 |
End bp | 4981343 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640476666 |
Product | DGPFAETKE family protein |
Protein accession | YP_001161209 |
Protein GI | 145596912 |
COG category | [S] Function unknown |
COG ID | [COG3795] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.354347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGT ACCTGCTGCT CAAGCACTAC CGGGGTGGCC CGACTCCCGC CGTGGACGGG GCGCCGATGG ACCAGTGGAC GCCGGACGAG GTCGACGCGC ACATGCGGTT CATGCACGAC TTCGGGGCGC GGCTGGAGGA GACGGGCGAA CTCGTCGACG CCCAGGCGCT GTCGCCCGAC GGCGCGTTCG TGCGGTACGA CGGCGAGGGG CGGCCACCGG TGACCGACGG GCCGTTCGTC GAGACCAAGG ACCTGATCGC CGGGTGGTAC GTCATCGACG TGGAGTCGTG GGACCGCGCG GTGGAGTTGG CGGGGGAGCT GTCGGCGGCC CCCGGGCCGG GCGGTAGGCC GATCCACGAG TGGCTGGAGG TGCGACCGTT CTACGGCGTA CCGGCGGCTG TGACGGAGTG A
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Protein sequence | MAKYLLLKHY RGGPTPAVDG APMDQWTPDE VDAHMRFMHD FGARLEETGE LVDAQALSPD GAFVRYDGEG RPPVTDGPFV ETKDLIAGWY VIDVESWDRA VELAGELSAA PGPGGRPIHE WLEVRPFYGV PAAVTE
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