Gene Strop_4403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4403 
Symbol 
ID5060889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4980933 
End bp4981343 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content72% 
IMG OID640476666 
ProductDGPFAETKE family protein 
Protein accessionYP_001161209 
Protein GI145596912 
COG category[S] Function unknown 
COG ID[COG3795] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.354347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGT ACCTGCTGCT CAAGCACTAC CGGGGTGGCC CGACTCCCGC CGTGGACGGG 
GCGCCGATGG ACCAGTGGAC GCCGGACGAG GTCGACGCGC ACATGCGGTT CATGCACGAC
TTCGGGGCGC GGCTGGAGGA GACGGGCGAA CTCGTCGACG CCCAGGCGCT GTCGCCCGAC
GGCGCGTTCG TGCGGTACGA CGGCGAGGGG CGGCCACCGG TGACCGACGG GCCGTTCGTC
GAGACCAAGG ACCTGATCGC CGGGTGGTAC GTCATCGACG TGGAGTCGTG GGACCGCGCG
GTGGAGTTGG CGGGGGAGCT GTCGGCGGCC CCCGGGCCGG GCGGTAGGCC GATCCACGAG
TGGCTGGAGG TGCGACCGTT CTACGGCGTA CCGGCGGCTG TGACGGAGTG A
 
Protein sequence
MAKYLLLKHY RGGPTPAVDG APMDQWTPDE VDAHMRFMHD FGARLEETGE LVDAQALSPD 
GAFVRYDGEG RPPVTDGPFV ETKDLIAGWY VIDVESWDRA VELAGELSAA PGPGGRPIHE
WLEVRPFYGV PAAVTE