| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4401 |
|---|
| Symbol | |
|---|
| ID | 5060887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 4978851 |
|---|
| End bp | 4979747 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640476664 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001161207 |
|---|
| Protein GI | 145596910 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.733207 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.750222 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGTCC TGCGGGTCGC TCCGCGCACC GCCGTGGTGC TGGTGCTCGC CTCGGTCGCC
GCGCTGGCCA CCTTCACCTG GCCGCTCTTC GTCCCCGTGC AGCCGGAGAG CACCGCCCGC
GCCGGGGAGG CGCCGCTGGT CTTCGTCGTC ATGTTGCCGG TGTTGGTGGC GCTGGTGCTG
GCGGAACTCA CCTCCGGTGG GATCGACAGC AAGGCCCTGG CGATGCTCGG GGTGCTCGCC
GCGGTCAACG CCGCGCTGCG CCCGCTCGGT GCCGGCACCG CCGGCATCGA GACGGTGTTC
TTCCTGCTCG TCCTCGCCGG CCGGGTCTTC GGACCGGGGT TCGGCTTCCT GCTCGGCTCC
ACATCGCTGT TCGCCTCCGC GCTGCTCACC GCCGGCGTCG GCCCCTGGCT GCCGTTCCAG
ATGCTCGCCG CCTCCTGGGT GGGACTCGGC GCCGGCCTGC TCCCCCGTCG GCCCCGCGGT
CGCGCCGAGG TCGCTCTGCT GGCCGGGTAC GGCGCGCTCG CCGCCTACGG CTACGGGCTG
CTGATGAACC TCTGGTTCTG GCCGTTCAGC GCCGGCGCGG AGACCCAACT CTCCTACGTG
GCCGGTGCGC CGGTGCTGGA GAACCTGCAC CGCTTCGTCA TCTTCACCGC GGTGACCTCC
ACCTTCGGCT GGGACACCGG ACGGGCGATC ACCACCGCCG TGATGATCGT CCTCGCCGGC
CCGGCGGTGC TCGCCGCGCT GCGCCGCGCC GCCCGCAAGG CCGCGTTCGA CGCCCCGGCG
ACGTTCGCCG CACCCGAGCC GGGGATGCCG GCGTCGCTAC CGGCCCCGCT CATGCCCGCG
CAGGAGGGGC CCGATACCGG AGATCAGGGC CAAGCAGGGT ACCGGCGCCG ACAATGA
|
|---|
| Protein sequence | MSVLRVAPRT AVVLVLASVA ALATFTWPLF VPVQPESTAR AGEAPLVFVV MLPVLVALVL
AELTSGGIDS KALAMLGVLA AVNAALRPLG AGTAGIETVF FLLVLAGRVF GPGFGFLLGS
TSLFASALLT AGVGPWLPFQ MLAASWVGLG AGLLPRRPRG RAEVALLAGY GALAAYGYGL
LMNLWFWPFS AGAETQLSYV AGAPVLENLH RFVIFTAVTS TFGWDTGRAI TTAVMIVLAG
PAVLAALRRA ARKAAFDAPA TFAAPEPGMP ASLPAPLMPA QEGPDTGDQG QAGYRRRQ
|
|---|
| |