| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4391 |
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| Symbol | |
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| ID | 5060877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4968751 |
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| End bp | 4969641 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640476654 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001161197 |
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| Protein GI | 145596900 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.424954 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAGG ATATCCTGTG CGCGTTTGGT GTCGACATGG ACGCGGTCGC CGGCTGGCTG
GGATCGTACG GCGGCGAAAA TTCGCCCGTC GATATCTCCC GTGGCATTTT CGCTGGTGAG
GTCGGCACAC CACGCCTCCT TAACCTGTTT GAAAGATATG ATCTTCCGAG CACCTGGTTC
GTGCCTGGAC ACTCCATCGA GACATTTCCC GAACAGTTCC GCCAGATCGT GGACGCCGGC
CACGAGGTAG GCCTCCACGG TTACAGCCAT GAAAACCCGA TCGCGATGAG TCATACGCAG
GAGGCCGCCG TCCTGGACCG GTGCATCGAC CTGATCGAGT CGGTAGTCAA ACAACGCCCC
AGGGGCTACG CCGCGCCGTG GTGGGAGTTC TCGCCGGTCA CGCACAAGCT ACTACTCGAG
CGGGGCATCC GGTACGACCA CTCGCTGATG CACGACGACT TCACCGTCTA CCGGGTCCGT
GTGGGTGAGA CCTGGACCAA AGTCGATTAT TCCGCGGATG CCGAGGACTG GATGAAGCCG
TTGGTCCGCG GCGAGGAGAC CGATCTCATC GAGATTCCGG CGAACTGGTA TCTCGATGAC
CTGCCACCAA TGATGTACAT CAAGGCCAGC CCGAACAGCC ATGGCTACGT CAACCCGCGA
CAGCTCGAGG AGATGTGGCG TGACCAATTC GACTGGGTCT ACCGGGAGCT GGACTACGCC
GCATTCACTT TCACCATCCA TCCAGACGTG TCGGGACGCC CGCAGGCGCT TCTGATGCTC
GAGCGAATGA TCGAGCACAT CAACCAGCAT GAAGGCATCA GGTGGGCCAC CTTCGACGAC
ATCGCCACCG ATTTCGCACG TCGCTACCCA CGCACTGGAG ACAGCGATTG A
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| Protein sequence | MPKDILCAFG VDMDAVAGWL GSYGGENSPV DISRGIFAGE VGTPRLLNLF ERYDLPSTWF
VPGHSIETFP EQFRQIVDAG HEVGLHGYSH ENPIAMSHTQ EAAVLDRCID LIESVVKQRP
RGYAAPWWEF SPVTHKLLLE RGIRYDHSLM HDDFTVYRVR VGETWTKVDY SADAEDWMKP
LVRGEETDLI EIPANWYLDD LPPMMYIKAS PNSHGYVNPR QLEEMWRDQF DWVYRELDYA
AFTFTIHPDV SGRPQALLML ERMIEHINQH EGIRWATFDD IATDFARRYP RTGDSD
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