Gene Strop_4371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4371 
Symbol 
ID5060857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4946339 
End bp4947499 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content66% 
IMG OID640476634 
Productpurine phosphorylase family 1 
Protein accessionYP_001161177 
Protein GI145596880 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0775] Nucleoside phosphorylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.744094 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACACGA ACAGCGGTTT CGTCGTGATC CTCACGGCGC TGAACCTCGA GTACGAAGCG 
GTCCGCGACC AACTGGCCGA CCTTCGGGTA CGCCCCCACC CGGCCGGAAC CCGCTTCGAA
GTAGGCAAGC TCGGCCAGAG CGGCTGCCGG GTCGCGCTGG GACTGGCTGG CAAGGGCAAC
CATCCGGCCG CAGTAATCGC GGAACGAGCG ATCGCACAGT TCTCACCGAC CGCGATGCTG
TTCGTGGGAA TCGCTGGCGG GTTGTGGCCC ACCATCCGGC TCGGTGATGT CGTCGTCGCC
AGCAAGGTCT ACGCCTACCA CGGTGGCACC AGCGAGGACG ACGGTCTGAA GGCACGACCG
AAGTCGTGGG AGATACCCCA CGAGGCTGAT CAGATCGCCC ACCACCTCGA TCGTTCTGGC
ACGTGGCATC GGAACCTTCC CACCGCCACG GCACCCCGCG TCCACTTCGG TCCGATCGCC
GCGGGAGAAG TCGTACAGGA CTCGGGCATC TCCGACCAGG CCCGCTGGAT TCGTCAGCAC
TACCACGACG CCATGGCGAT CGAGATGGAA GGCGCAGGCG CGGCTCAGGC GGGCCATCTC
AACAGGGCTC TGCCCGTGGT GGTCGTACGC GGCATCAGTG ACCACGCCGA CGGCAGCAAG
GCAGCCATGG ACGGACAGAA CTGGCAACCG AAGGCCGCAC GGCACGCTGC CGCGTTCGCT
ACCGCACTCG CAGAAGAACT GATCACTCAG TCCCCCCACA GCCGGGGCGA CACCGACCGG
GACGGGAGCC GCACGATGCA GATGACCAAC TCCAACCTCG CCACCGGAAA CGCGCAGGTC
GGGTTCCAGG CCGGGCAGAT CAACGGCAAC ATCACCGTCG GGGCCACCCC CGCCCAGTCG
ACCGACGACG TTGCGGCCAG CATTGCGGAG CTGCGAACCC GACTCAAGCA GGCCCACCTC
GACGGGCAAC TGGACGAAGA AACCTACGTC GCCGCCGAGT CGGAGTTGGA AGCAGCGGCG
GAGTGTGTCG CGGCGGGCAT ACCGGAGAAG AAGAGTGGCC TGGTGGTCGC GCTCAAGCGA
TTGCGCGGTC TGGTGGCCGA TGTGTCGGAG CTGGCGGCGC GGCTAGCGGC CATCATCGCC
GTGGTGCGGA GTATGTCATG A
 
Protein sequence
MNTNSGFVVI LTALNLEYEA VRDQLADLRV RPHPAGTRFE VGKLGQSGCR VALGLAGKGN 
HPAAVIAERA IAQFSPTAML FVGIAGGLWP TIRLGDVVVA SKVYAYHGGT SEDDGLKARP
KSWEIPHEAD QIAHHLDRSG TWHRNLPTAT APRVHFGPIA AGEVVQDSGI SDQARWIRQH
YHDAMAIEME GAGAAQAGHL NRALPVVVVR GISDHADGSK AAMDGQNWQP KAARHAAAFA
TALAEELITQ SPHSRGDTDR DGSRTMQMTN SNLATGNAQV GFQAGQINGN ITVGATPAQS
TDDVAASIAE LRTRLKQAHL DGQLDEETYV AAESELEAAA ECVAAGIPEK KSGLVVALKR
LRGLVADVSE LAARLAAIIA VVRSMS