| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4354 |
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| Symbol | |
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| ID | 5060839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4932253 |
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| End bp | 4934658 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640476616 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001161160 |
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| Protein GI | 145596863 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGAAAC GTGATCATAA TGTTCTGACC AACGCCGCAT CGCTACTTAT CTGTGGCTTG
CTCGCCGGAG TGGTGCTCGC CGCGGCGGCC TTCCCCGCGG TGGCCCTGTC CGGACTGGCC
GCGAAGGCCG GGGCAGAGAC CTTCGACGCC CTCCCCACCG AGCTGGTCGT TGGCGCCGGG
CCCCAGAAGA GCCGCCTGCT CGCCGCCGAC GGCAAGACCA CGTTGGCCAC CATGTACGAC
GAGAACCGCC GCGACATCAC CAAGCTCGAC GACATCGCGC CGGCCATGCA GAAGGCGATC
CTCGCCGCCG AGGACCACGA CTTCTACCAG CACAACGGAG TCGACCTCAA CGGCGTCGCC
CGGGCCTTCG TCAACAACAG CCAGGAGGGC TCCTACCAGC AGGGAGCCTC CACGCTGACG
ATGCAGTACG TCCGACTCGC CATCGCGTAC TCGGCGACCC ACCCGGCCGA CGTGGTCGCG
GCCACCGAGG ACACCACCGC CCGCAAGCTG CGCGAGATGC GCTTCGCCCT ACAGATCGAG
AAGGAGTTCT CCAAGGACGA GATCCTGCTG CGCTACCTCA ACATCGCCTC GTTCGGCAAC
GGCGCGTACG GCATCCACGC CGCCAGTCAG GTCTACTTCG CCAAGTCGCC GAGCGAGCTC
ACCATCGCCG AGGCGGCGCT CCTCGCCGGC CTCGTCAAAG CCCCCAGCAC GTTGGACCCG
ACCACCCCCA GTGGCTACCC GAACGCGGTG GCCCGGCGCG ACTACATCCT CAACCACATG
GTGGAGATCA ACGCCATCAC CAAGGAGGAG GCCGAGGAGG CCAAGGCCAG CAAGCCGAAG
ATCGTCGGCA AGCGGGCGCC GAACGGCTGT GTCGACACCA ACACCCAGGA GTGGGGGTTC
TTCTGCGACT ACTTCTACCG CTGGTGGCTG GAGCAGGAGG CGTTCGGTTC GACCTCGTAC
GACCGGGAGC GACGGCTCAA GAGCGGCGGC TTCGAAATCA TCACCACGCT GGAGCCCCAG
GTCCAGGAAG CCGCCGACAA GGCGGTACGG AAGAACCTGC CGGCCACCAG TAAGGCCGCG
CGGATGCTCG CCGTGGTCGA GCCCGGCACC GGCCGGGTCC GCGCGCTCTC CACCAACCGC
AACTACAAGC TGGACGACCC GGCCAACCCG GAGAACAAGC CACACAGCGA CCCGGCGAAG
CGCAGGACCG GGGCGCTCGG CAACTATCCG AACACCGTCA ACCCGCTCCT CACCGGCGGT
GACGGCATCA CCGGTTACCA GGCCGGCTCG ACATTCAAGA TCTTCACCGT GGTGGCCGCG
CTGGAGAAGG GTATCCCGCT CAGCCACACC ATCAACGCCG AGCAACGGTT CCGGTCCGAC
TACCCCATCG ACAGGCGCAA CCCCGCGGCC TGCGACGGCC CCTACTACTG CCCGGGAAAC
GCGAGCCCCA GCATGGCCGG CGTGCACAAC ATGTGGAGCG CGTTCGGACG GTCGGTGAAC
ACCTACTTCG TCCCCCTTCA GCAGCAGGTG GGCGCGGAGA ACGTGGTCGA GGTCGCCAAG
AAGCTCGGCA TCACCTTCCG CACCCAGGAA GACCTGGATC TGGAGAAGGG CGCCCACCAG
TGGGGTGCCT TCACCCTCGG CGTCTCCCAG ACCACGCCGC TGGAGCTGGC CAACGCGTAC
GCCACCCTCG CCGCCGAGGG GCTGTACTGC GAGCCGATCC CGGTGCAGGA GATCCGCGAC
CCGGCGGGTA ACAAGCTCGA CATCGCCAAC CCCCGCTGTG AGCAGCGGAT CAGCACCGAG
GTGGCCCGCG CCGCCGTCGA CGCCGCCCGC TGCCCGGTCG GTGACCGCTC GTCCACGACG
AAATGCACCG GCGCGACGGC CGGCAACGTG CGGAACATCG TCGACGCCCC GGTCGCCGGC
AAGTCCGGCA CCACCGACAA GGACAAGACC GCCTCCCTGG TCGCGATGAC CAAGCAGTAT
GCGGTCGCCG GCATCATGGC CGACCCGGAC TGGCCGCAGA CCACCCAGCG AATGGGTCAC
GACGTTCGCA AGGGCATCAA CCCGCCGGTC TACGAGACGC TACGCGACGC GATGAAGGGC
AAGCCCAGGA TCGACTTCAC TCCGCCAGAG AACAAGCTCC GCTACGGGGA CCAGCGGTCG
ATCCCGACCG TCAAGTGCGT CAGCGTGGAG AAGGCGAAGT CCCGCATCAC CGAGGCCGGG
TTCGCGGTGG TCGTCTCGCC GAACCGGGTC GAGTCGAACT GCCCGGCCGG CACCGCTGCC
GGGACCACCC CGGGCGGCCG TACCGCCAAG GGCAGCGTCG TCACCATCAA GGTCAGCTCC
GGACCGGCCC CAAGGGAAAC CGAGCCCACC GAGCCGGGCA GACCGACGGA ACGCCCCGCC
GACTAG
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| Protein sequence | MRKRDHNVLT NAASLLICGL LAGVVLAAAA FPAVALSGLA AKAGAETFDA LPTELVVGAG
PQKSRLLAAD GKTTLATMYD ENRRDITKLD DIAPAMQKAI LAAEDHDFYQ HNGVDLNGVA
RAFVNNSQEG SYQQGASTLT MQYVRLAIAY SATHPADVVA ATEDTTARKL REMRFALQIE
KEFSKDEILL RYLNIASFGN GAYGIHAASQ VYFAKSPSEL TIAEAALLAG LVKAPSTLDP
TTPSGYPNAV ARRDYILNHM VEINAITKEE AEEAKASKPK IVGKRAPNGC VDTNTQEWGF
FCDYFYRWWL EQEAFGSTSY DRERRLKSGG FEIITTLEPQ VQEAADKAVR KNLPATSKAA
RMLAVVEPGT GRVRALSTNR NYKLDDPANP ENKPHSDPAK RRTGALGNYP NTVNPLLTGG
DGITGYQAGS TFKIFTVVAA LEKGIPLSHT INAEQRFRSD YPIDRRNPAA CDGPYYCPGN
ASPSMAGVHN MWSAFGRSVN TYFVPLQQQV GAENVVEVAK KLGITFRTQE DLDLEKGAHQ
WGAFTLGVSQ TTPLELANAY ATLAAEGLYC EPIPVQEIRD PAGNKLDIAN PRCEQRISTE
VARAAVDAAR CPVGDRSSTT KCTGATAGNV RNIVDAPVAG KSGTTDKDKT ASLVAMTKQY
AVAGIMADPD WPQTTQRMGH DVRKGINPPV YETLRDAMKG KPRIDFTPPE NKLRYGDQRS
IPTVKCVSVE KAKSRITEAG FAVVVSPNRV ESNCPAGTAA GTTPGGRTAK GSVVTIKVSS
GPAPRETEPT EPGRPTERPA D
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