Gene Strop_4340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4340 
Symbol 
ID5060825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4918063 
End bp4918761 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content72% 
IMG OID640476602 
ProductCutC family protein 
Protein accessionYP_001161146 
Protein GI145596849 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3142] Uncharacterized protein involved in copper resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.172331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAG TGGAAATCTG CGTCAGTGAT GTGCCGACCG CACTGGTGGC CGAGGCGGCC 
GGAGCCGACC GACTGGAGCT CTGCGCCGAC CTCGGCCAGG GCGGCACCAC CCCGAGCCTG
GGGACGGTTG AGGTCGCCCT GCGTACGCTG CGTGCGGTCG ATGTGCGCAT CATGATCAGG
CCCCGGGGCG GCGACTTCCG GGTGAGCGAG ATCGAACGCC AGGTCATGCT CGCCGATATC
GCGGCGATTC GCGAACTGCC CAACCCTCAC GGTCTCACGG TCGGGGTGGT GGTCGGCGCG
CTCACCCCCG ACAACAACCT CGATCTGGCC GTGCTGCGGC ACATGATCGA GGCGGCGGGG
CCGTTGCCGG TGACCGTCCA CAAGGCCTTC GACGAGGTCG ACGACCAGCT TGCGGCAATC
GACCAGGTTG TCGGCCTCGG GGCGGACGCG GTGCTCACCT CGGGCGCGGC GGCCACCGCG
CTGGCCGGCG CCGCCCGCCT CGCCGCGCTG CGGCAGCGGG CCGGCGATCG ACTTCGGGTG
ATCGCCGCCG GCGGAATCCG TTCCCACAAC GTCCGCCAGG TACTCACCGA GACCGGGGCA
CGGGAGGTCC ACCTGCGCGC GCCGGTGCAG CGCGACGGAC GCGAGGCGAC CGACGGCGAC
GAGGTGAGCC GACTCGTCGT CGCCGCGCGT GGGCGTTGA
 
Protein sequence
MTTVEICVSD VPTALVAEAA GADRLELCAD LGQGGTTPSL GTVEVALRTL RAVDVRIMIR 
PRGGDFRVSE IERQVMLADI AAIRELPNPH GLTVGVVVGA LTPDNNLDLA VLRHMIEAAG
PLPVTVHKAF DEVDDQLAAI DQVVGLGADA VLTSGAAATA LAGAARLAAL RQRAGDRLRV
IAAGGIRSHN VRQVLTETGA REVHLRAPVQ RDGREATDGD EVSRLVVAAR GR