| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4339 |
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| Symbol | |
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| ID | 5060824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4915940 |
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| End bp | 4918066 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640476601 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001161145 |
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| Protein GI | 145596848 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.108178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.933802 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAT CGATCGGTCC AACTGCCCGG CACTCCGCGC CGGCTGTGAA CGCGGCAGCC
GGCCGGCCCC TGCTGGAACT ACGTGACCTC GACACCGACA TCGCGCTGCG CCGTGGCACG
GTACACGCCC TCGACGGCAT CAGTCTTGAG GTCGCGCCCG GGCAGACCCT CGGCGTCGTG
GGCGAGTCCG GCAGCGGCAA GACGATGACC GCATTGTCAA TCATGGGACT ACTTCCGCCC
GGCGGTCGCG TCACCGGTGG GCAGATTCTG TTCGAGGGAC GGGATCTGCG ATCGTTGCCG
GCCGATGAGG TACGCCGGAT CCGAGGTGTC CGGATGGGCA TGGTCTTCCA GGACCCGCTC
ACCTCGCTCA ACCCCACCAT ACGCATCGGT GCGCAGGTGG CCGAACCACT GCGCGTACAC
AAGCGGGTCG GCAGGGCGGA GGCCCGGGAC CGGGCCATCG AGATCCTGCG CCGGGTCGGG
ATGCCGCGCC CGGAACAAAT CGTCGACAAC TATCCGCACG AGCTGTCCGG CGGTATGCGG
CAACGGGTCG CCATCGCCAT GGCCCTGGTC TGCTCACCAA GCCTGCTCAT CGCCGACGAG
CCGACCACCG CACTCGACGT CACCACCCAG CGGCAGATCC TCGAACTCAT CGACGATCTT
CGGGAAGAGT TCGGGATGGC CGTCATCCTG GTCACCCACG ACCTCGGGGT GATCGCCGGT
CGGGCGGACC GGGTAGCCGT CATGTACGCC GGTCGGGTCG TGGAGACCGC GGCCACCGAG
CAGCTGTTCC AAGCGCCCCG ACACCGCTAC ACCGAGGCCC TGATGCGGGC GCTACCCGAG
TCGGCCATCC GGGACAGCGG CGGACACGAC CGGCTGATCA GCATCCCGGG ACTGCCACCG
GACCTGTCCG GTCCCCTAAC CGGATGCCGG TTCGCGCCGC GGTGTTCGTA TGTCAGCGAC
AGCTGCCGGA CCACCGACCC GGCCCTGATC CCGGGCGCGC ACCAGCACGC GTGTCTGCAC
CCGGTACCCA CGCCCACCGC GGCGGTCACC GCGCCGGTCC CGGCACCGAT CGAGCCGGCG
ACGGCGCCGG TCACCGCGGC ACCGCCCGAA TCCACGGAGC CGCCAGTCCT GTCGGTGCGG
AACCTGATCA AGAACTACCC GGTGCACGGC CGTGGGCTAC TGCGCCGGAC AGCCGGGCAG
GTAAGCGCGG TAGCCGATGT CTCCTTCGAG GTCAGGCCCG GAGAGACCTT CGGGCTCGTC
GGCGAGTCCG GCTGCGGCAA GTCCACCGTG GGACGGCTGT CCGTCGGCCT GGAACGGGCC
TCCGCCGGGC AGATCGTGTT GGACGGTACG GATCTCGCCG ACCTCACCGG CCGGGAACGA
CGCCGGATGC ACCGGCACGT CCAACTCATG TTCCAGGACA GCTATGCGGC GATGAACCCT
CGGATGCGCG TTGACGCCAT CCTCGCCGAA CCACTCGAGA TCCAGAAGGT GGGTGACGGT
TCGGCACGGC AAGCACGGAT CGCCACTCTC CTCGACCAGG TGGGGTTGCC CCGGCGGGCG
CTGGAACGCT ACCCCCACGA GTTCTCCGGC GGTCAGCTGC AGCGGATCGG GCTGGCCCGG
TCGCTGGCGT TGCGCCCCCG GCTGATCGTT GGCGACGAGC CGGTGAGCGC GTTGGACGTC
TCGATCCAGG CGCAGGTGCT CAACCTGATG CGGGACCTGC AGCGCGAACT CGATCTGGCG
TACATCTTCA TCAGTCATGA TCTGTCTGTT GTCGACTACA TGGCAGACCG GATCGGTGTG
ATGTACCTCG GCAAGCTCGT CGAGGTCGGG CCCGCCCGGG AAGTGGTGCG GGCTGCCCGG
CATCCGTACA CGCAGGCACT GGTCGACGCG GTCCCGTCCA TCGAGCCGAA CCGGGCAGCC
ACTCGCGACG GCATGACCAT CCGGGGCGAG CTTCCCAGTG CCCTCGACCC ACCCACCGGG
TGTCGGTTCC GCACGCGCTG CCCCTACGCG GTGGACATCT GCACAACGGA GCCTCCACTG
ACCGGTGACC TGCACCAGGT GGCCTGCCAC CTGCCGCTAC GCCCGGAGCC GACCAGCACC
TCCACGCAGG CCCAGGCTGT CGTATGA
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| Protein sequence | MSESIGPTAR HSAPAVNAAA GRPLLELRDL DTDIALRRGT VHALDGISLE VAPGQTLGVV
GESGSGKTMT ALSIMGLLPP GGRVTGGQIL FEGRDLRSLP ADEVRRIRGV RMGMVFQDPL
TSLNPTIRIG AQVAEPLRVH KRVGRAEARD RAIEILRRVG MPRPEQIVDN YPHELSGGMR
QRVAIAMALV CSPSLLIADE PTTALDVTTQ RQILELIDDL REEFGMAVIL VTHDLGVIAG
RADRVAVMYA GRVVETAATE QLFQAPRHRY TEALMRALPE SAIRDSGGHD RLISIPGLPP
DLSGPLTGCR FAPRCSYVSD SCRTTDPALI PGAHQHACLH PVPTPTAAVT APVPAPIEPA
TAPVTAAPPE STEPPVLSVR NLIKNYPVHG RGLLRRTAGQ VSAVADVSFE VRPGETFGLV
GESGCGKSTV GRLSVGLERA SAGQIVLDGT DLADLTGRER RRMHRHVQLM FQDSYAAMNP
RMRVDAILAE PLEIQKVGDG SARQARIATL LDQVGLPRRA LERYPHEFSG GQLQRIGLAR
SLALRPRLIV GDEPVSALDV SIQAQVLNLM RDLQRELDLA YIFISHDLSV VDYMADRIGV
MYLGKLVEVG PAREVVRAAR HPYTQALVDA VPSIEPNRAA TRDGMTIRGE LPSALDPPTG
CRFRTRCPYA VDICTTEPPL TGDLHQVACH LPLRPEPTST STQAQAVV
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