| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4336 |
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| Symbol | |
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| ID | 5060821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4912192 |
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| End bp | 4913991 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640476598 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001161142 |
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| Protein GI | 145596845 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.168516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.284884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGCA GATTTCCCGG CCGCGCCCTG CGTGGCGCGG TGGCGGCAGC CGCCACGATC
GCCCTTGGGG CGGGTCTGGT CGGCTGCGGT GACAACAGTG GATCCAAGGA CGGCGGTAGT
CAGGGCAAGG ACACCGTGAC AGTCGCCTTC CGTACCCCCA ACTGGATCCT GCCGATCTCG
GCACCAGGCT TCACCCAGGG GGAGAACGCC ATCTTCGGCC AGGCGCTCTA CCGCCCCCTC
TACCAGTACC GGCTGGACGG CACGGCGCAG TACAACATCG ACCCAGAACG CTCGATGGCC
GAGCCCCCGC AGGTGAGCGA CGACGGCCGC ACGCTGACGA TCACGTTGAA GGACAACTCC
TGGTCCGATG GCACGCCCAT CACCACCAGG GACATCCAGT TCTGGTACGA CCTGGTCTCG
GCGAACAAGG ACAAGTGGGC GTCGTACCGG GCCGGCGGCT TCCCCGACAA CGTTGACGCG
TGGTCGATCA AGGATGAGAA GACCTTCTCG ATCACCACCA CGGAGGTCTA CAACACCGCG
TGGTTCGTCG ACAACCAGCT CAACCGCATC ACGCCCCTGC CCCAGCACGC CTGGGACAAG
GACTCCGCGA CCGCCGACGT GAGCGACCTC GCCAGCAGCC CGGAGGGCGC CAAGAAGGTC
TTCGACTTCC TCATCGCCGC CTCGAAGGAC CCCAAGACGT ACGACTCCAA CGAGTTGTGG
CAGGTCACCA GCGGCGCGTG GACGCTGGAG AAGTACGTGC CCAACGGTGA GGTCACCCTC
GCCGCCCAGC CGAACTACTC CGGTACCGAC AAACCGAAGC TCTCCACGGT CGTGTTGCGG
CCGTTCACCA GCGATGACGC CGAGTTCAAC GTGCTCCGCG CCGGCGACAT CGACTACGGG
TACGTGCCGC CGGCCAACAT GTCCCAGAAG AGCTACCTCG AGTCCAAGGG ATACACGATC
TCACCGTGGT ACGGCTGGTC GATCACCTAC CTCCAGCTGA ACTACAACAA CCCGAAGTCC
GGCGTGCTGT TCAAGCAGCC CTACCTTCGG CAGTCGCTGC AGATGCTCAT CGACCAGCCG
ACGATCAGCA AGGTCATCTG GTCGGACACC GCCGCGCCGA CCTGCGGCCC GGTACCGGCC
AGGCCCGGCA CCAACACCGA CGCCGCCGGG TGCGCGTACT CCTTCGATCC GGCGAAGTCC
AAGGAACTGT TGGAGAGCAA CGGCTGGAAG GTGACCCCGG ACGGGCAGAC CACCTGCCAG
TCGCCGGGCA CCGGCCCGAA CCAGTGCGGT GAGGGAATCG CCGCCGGCAC ACCGCTCGAG
TTCACGGTGA CCAGCCAGAC CGGGTTCGCC GCCACGACCA AGATGTTCGC CGAGATCAAG
TCACAGATGG CCAAGCTCGG TATCCAGCTG ACGATCAAGG AGGTGCCCGA CTCGGTCGCG
GTCACGCCGA CCTGTGAGCC GACCGAGGCG AGCTGCTCGT GGGACATGTC CTTCTTCGGC
TCGCAGGGCA GCTGGTACTA CCCGGCCTTC GCCAGCGGCG AGCGGCTCTT CGCCACCGAC
GCCCCGGTGA ACCTGGGCAG CTACAGCAAT CCTGAGGCGG ACAAGCTCAT CGAGGCCACT
CAGTTCGCTG GCGACGAGAG CGCGCTCATG GCGTACAACG ACTTCCTGGC CAAGGACCTG
CCCGTGCTCT GGATGCCGAA TCCGGTGTAC CAGGTCTCGG CGTACCGCTC CGGCCTGCAG
GGCGTCGAGC CTCAGGACCC GATGAACCTC ATGTACTTCC AGGACTGGTC CTGGGAATAG
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| Protein sequence | MTSRFPGRAL RGAVAAAATI ALGAGLVGCG DNSGSKDGGS QGKDTVTVAF RTPNWILPIS
APGFTQGENA IFGQALYRPL YQYRLDGTAQ YNIDPERSMA EPPQVSDDGR TLTITLKDNS
WSDGTPITTR DIQFWYDLVS ANKDKWASYR AGGFPDNVDA WSIKDEKTFS ITTTEVYNTA
WFVDNQLNRI TPLPQHAWDK DSATADVSDL ASSPEGAKKV FDFLIAASKD PKTYDSNELW
QVTSGAWTLE KYVPNGEVTL AAQPNYSGTD KPKLSTVVLR PFTSDDAEFN VLRAGDIDYG
YVPPANMSQK SYLESKGYTI SPWYGWSITY LQLNYNNPKS GVLFKQPYLR QSLQMLIDQP
TISKVIWSDT AAPTCGPVPA RPGTNTDAAG CAYSFDPAKS KELLESNGWK VTPDGQTTCQ
SPGTGPNQCG EGIAAGTPLE FTVTSQTGFA ATTKMFAEIK SQMAKLGIQL TIKEVPDSVA
VTPTCEPTEA SCSWDMSFFG SQGSWYYPAF ASGERLFATD APVNLGSYSN PEADKLIEAT
QFAGDESALM AYNDFLAKDL PVLWMPNPVY QVSAYRSGLQ GVEPQDPMNL MYFQDWSWE
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