Gene Strop_4332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4332 
Symbol 
ID5060817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4906612 
End bp4908045 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content67% 
IMG OID640476594 
Producthypothetical protein 
Protein accessionYP_001161138 
Protein GI145596841 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.252215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0577257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCATC AGGACCATAC CCGGGGGTAC GAACCGGTCC GCCCCGACGA GGGCCGGCGG 
GGATCACGGT GGCGGTGGTG GGCTGTGGGG CTGGCCGGGG TGACCGGCCT GGCTCTCACC
ACCACGGGTG TCGCCGTCCC GGCCGCGGAG GCGGCCGGAC GCCCGCTCAC CTCCGCCGAC
GAGCGGCCTT CTGCCGACGA GCGGCCCTCC GCCGACGAGC GCCGTAGCGG GGGCGAGTCC
GGCACGGGCA AGGGAAAGAA GGAGCCGAAG CCGAAGGGCG TTCCGGTCCC CTGTGACGCG
GACAAACTCA TCGCCGCGAT CACCCTGGCC AACGCCCGCG GCGGTGCCGT GCTCGACCTC
GCCAAGAAGT GCACCTACCT GCTCACCGCC ACCATCGACG AGGGCGCCGG CCTGCCGGTT
ATCACCGCCC CCATCACCCT CAACGGCGGC AAGCACACCA CCATCAAACG CGCCGCCGGT
GTGGAGGAGT TCCGCATTGT CACCGTCGGC ACCGGCGGTG ACCTCACCCT CAACCACCTG
ACAGTCACGG GTGGACAGAC CGACGGCGAC GGCGGAGCAA TCCTGGTCAA CGCCGGCGGA
GCGTTGACCA CCAACCACAG CACCGTCACC CGCAACATCG CTGGCAGCGA CGGCGGCGGA
AGCAGCGGCG GTATCGCCAA CAACGGCATC ACCACCATCA AACACTCCAC CGTCAGCCGC
AACACTGCGG CAACCGCCGC TGGAGGCATC GGAAACACCG GTCAACTCGC CATCAAGAAG
TCCTCCGTCA CCGCGAACAT GGCCAACGCC GTCGTGGGCG GGTTCGGTGG AGGTGTCGGT
AGCTTCCCCG GCGGCACCAC GGTCGTGACT GGCAGCACCA TCAGCGGTAA CCACGCCGGC
GACGCTGGTG GAGGTGCCGG CGGCTTCAAC GCGAACGTCA CCGTCACCGA CACCGCCATC
ACCGGTAACA GAGCCAGCAA CGGCGGCGCG GTCTTCGCGG AGGGGGGAAT GCTGGCCCTA
CGCCACGTCA CAGTCACCAA CAACACCGCC ACCCTTCAGG GCGGCGGCCT CAGCCTCCAA
GCCCTCAACG CTGCGACCGT GGCCACCGTC GCGGACAGCA CAATCGCGCA CAACGTCGGC
AGTCTGAATG GTGGAGGTAT CGTCAACGCC GCGATCGCCT TCGCCTCCAC AGTCGATGTG
CGGAACACCC ACATCACGGC CAATCAGGCA ACGTTTGGTG GCGGAATCTT CAACATCGCC
GCCGACGCCA CGGTCACGCT CACCAACACG AAGGTCATCA AGAACATCGC CATCAGTACC
GGCGGGGGCA TCCTCAACTC GGGCGGAACA GTGAACCTGA ACACGGCCAC CGGTACCGTC
GTCGTCAAGA ATCGGCCAAA CAACTGCGTC AACGTGCCCG GCTGCGTCGG ATAG
 
Protein sequence
MNHQDHTRGY EPVRPDEGRR GSRWRWWAVG LAGVTGLALT TTGVAVPAAE AAGRPLTSAD 
ERPSADERPS ADERRSGGES GTGKGKKEPK PKGVPVPCDA DKLIAAITLA NARGGAVLDL
AKKCTYLLTA TIDEGAGLPV ITAPITLNGG KHTTIKRAAG VEEFRIVTVG TGGDLTLNHL
TVTGGQTDGD GGAILVNAGG ALTTNHSTVT RNIAGSDGGG SSGGIANNGI TTIKHSTVSR
NTAATAAGGI GNTGQLAIKK SSVTANMANA VVGGFGGGVG SFPGGTTVVT GSTISGNHAG
DAGGGAGGFN ANVTVTDTAI TGNRASNGGA VFAEGGMLAL RHVTVTNNTA TLQGGGLSLQ
ALNAATVATV ADSTIAHNVG SLNGGGIVNA AIAFASTVDV RNTHITANQA TFGGGIFNIA
ADATVTLTNT KVIKNIAIST GGGILNSGGT VNLNTATGTV VVKNRPNNCV NVPGCVG