| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4328 |
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| Symbol | |
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| ID | 5060813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4901819 |
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| End bp | 4903843 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640476590 |
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| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
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| Protein accession | YP_001161134 |
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| Protein GI | 145596837 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00647144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATCAGCA GACTTCTGGT CGCCAACCGG GGCGAGATCG CTCGCCGGAT CTTCACCACC
TGCCGGGCGC TCGGGATCGA GACGGTCGCC GTGCACTCCG ACGCGGACGC CGACGCGCCC
TTCGTCACCG AGGCTGACCA CGCTGTCCGG CTGCCCGGGA ACACGCCTGC CGAGACGTAC
CTGCGGATCG ACCTCGTCCT GGCCGCGGCC CGGCGGGCCG GCGCGGACGC CGTGCACCCG
GGCTACGGCT TCCTCGCCGA GAACGCCGAG TTCGCCACGG CGGTCACCGA CGCCGGGCTG
GCCTGGGTCG GGCCACCGGC CAAGGCGATC GCCGCGATGG GGGACAAACT GGCGGCGAAG
ACGCTGCTCG CCGAGGCCGA CGTCCCCATG CTGCCCAGTT GGACCGAGGC CGACCAGGTC
AACGGTTTCC CGGTGCTGGT CAAGGCAGCC GCCGGAGGTG GTGGGCGGGG CATGCGGGTG
GTCCGCGCCG CCGACGGTCT CACCGACGCC GTCGCCAGCG CCCGCCGCGA GGCGGCCTCC
GCGTTCGGCG ACGGCACCGT CTTCATCGAG CGGTACGTCG AACGCGGCCG CCATGTCGAG
GTGCAGATCC TGGGCGACCA GTTCGGGACG GTGCTGGCCC TTGGCGCACG GGACTGCTCG
ATCCAGCGCC GCCACCAGAA GATCGTCGAG GAGGCGCCGG GCGTGCTCGC GCCCGAGGTG
CGCCAGCGAC TCCACGAGGC GGCGGTGGCC GCCGGCCGGG CGGTCGACTA CGTCGGCGCG
GGCACGGTCG AGTTCCTGCT CGCCCCGGAC GGTGACATCT TCTTCCTGGA AATGAACACC
CGCCTTCAGG TGGAGCATCC GGTGACCGAG CTGACCACCG GCCTGGACCT GGTCCGCCTG
CAACTGCTCG TCGCCGAGGG CAACCCGCTG TCGATCGGTA CGACCCCACC GGCCACCGGG
CACGCGATCG AGGTACGCCT CTGCGCCGAG GACCCCGCCC AGGGGTACCG GCCGGCGACG
GGCACCCTGC ACCGGTTCAC GGTCCCCGGG GTGGCCACCG AGTTCGGGCC GCTGACCGGG
GCGGGCCTGC GGCTGGACTC CGGCGTGACG GACGGCTCGG TGGTGGGCAT CCACTACGAC
TCGATGCTCG CGAAGGTGAT CGCCTGGGCG CCCACCCGGG GCGAGGCGGC CCGCGCGCTG
GCCGGCGCAC TGGCCCGGGC CGAGCTGCAC GGTGTGGCCA CCAACCGGGA TCTGCTGGTA
CGCGTCCTGC GCAGCCCGGA GTTCGCCGCC GTTGACCTCG ACACCGGCTT CCTGGACCGG
CACCCCGAGG TCTTCGCGCC GCTGCTCGCC CCGGAGGAGC TTCCCGTGGC CGCGGTGGCG
GCGGCGCTCG CCTCCGCCGC CGGCCGTCGG GCTGCCGCCC CGGTGCTGGC CGGGCTCCCC
TCGGGCTGGC GCAACGTGCC CGCCTTCACG CAGGTCACCC GCTACGCCGA GCCGGACGGC
GGGGAGCTGG AGGTGCGCTA CCGCCTGGAC CGCCGCGGCG CGCTCGTCGA GTGGTCGGTG
GCATCGGGGG ACGGCTCGTC CGCCGCCGAC GACGACGCCG CGCCGGCCGG CGAGGCGCCG
GCCCTCGCTC TGCGCGAGGC CCGCCCCGAT CAGGTCGTCC TGGACGTCGC CGGGGTGCGG
CGAACATACC GGGTACACCG GGTGGGCTCG GAGATCTTCG TGGACGGCCC GGACGGCGCG
GTGGTCCTGG CCGAGCTACC GCGCTTCCCG CTGCCCGGCG CGGAGCTGGC GGCCGGGTCA
CTGCTCGCGC CGCTGCCCGG CACGGTGACC CGGGTGCAGG TCGAGCTCGG CCAACGGGTC
GCCGCCGGTG ACCTGCTGCT GACTCTGGAA GCGATGAAGC TGGAGCACCC GGTGCTCGCC
CCCACCGACG GCGTGGTCGC CGAGCTGCCG GTACCCACCG GCGGCCAGGT CGAGACCGGC
GCGGTGCTGG CCGTGGTCAA CCCCGACGAG GAGGCACAAC CATGA
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| Protein sequence | MISRLLVANR GEIARRIFTT CRALGIETVA VHSDADADAP FVTEADHAVR LPGNTPAETY
LRIDLVLAAA RRAGADAVHP GYGFLAENAE FATAVTDAGL AWVGPPAKAI AAMGDKLAAK
TLLAEADVPM LPSWTEADQV NGFPVLVKAA AGGGGRGMRV VRAADGLTDA VASARREAAS
AFGDGTVFIE RYVERGRHVE VQILGDQFGT VLALGARDCS IQRRHQKIVE EAPGVLAPEV
RQRLHEAAVA AGRAVDYVGA GTVEFLLAPD GDIFFLEMNT RLQVEHPVTE LTTGLDLVRL
QLLVAEGNPL SIGTTPPATG HAIEVRLCAE DPAQGYRPAT GTLHRFTVPG VATEFGPLTG
AGLRLDSGVT DGSVVGIHYD SMLAKVIAWA PTRGEAARAL AGALARAELH GVATNRDLLV
RVLRSPEFAA VDLDTGFLDR HPEVFAPLLA PEELPVAAVA AALASAAGRR AAAPVLAGLP
SGWRNVPAFT QVTRYAEPDG GELEVRYRLD RRGALVEWSV ASGDGSSAAD DDAAPAGEAP
ALALREARPD QVVLDVAGVR RTYRVHRVGS EIFVDGPDGA VVLAELPRFP LPGAELAAGS
LLAPLPGTVT RVQVELGQRV AAGDLLLTLE AMKLEHPVLA PTDGVVAELP VPTGGQVETG
AVLAVVNPDE EAQP
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