Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4323 |
Symbol | |
ID | 5060808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4895860 |
End bp | 4896465 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640476585 |
Product | regulatory protein, TetR |
Protein accession | YP_001161129 |
Protein GI | 145596832 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0245964 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGGCA CATCGACCCG CGTCCCACAG CAGGAGCGCA GCCGCGCCAC CCAGACCCGG CTGCTCGAGG CCACCGTGGC CTGCCTGGTC GAGCACGGCT GGTCGGGCAC CACAACGACC GTCGTGGCGA CCCAGGCCGG GGTGTCCCGG GGCGCCCAAC TTCACCACTA CCCCACCAAG GCAGCCCTGG TCACCGCCGC GGTCGCGCAC CTCGCCGAGC GGCGCGCGGA GGAGCTGCGC GCCGAGGCGA AGACCCTGCC CGCCGGTCCA CAGCGGTTGG ACCGGGTGGT TGACCTGCTC GCCGCGGCCT TCACCGGACC GCTCTTCGTG GCCGCCCTGG AGCTGTGGGT CGCCGCCCGC ACCGACCGCG AACTACGGGC GGCGCTGGTG CCGCTGGAAG CCCGACTCGG CCGGGAGATG CACCGACTGA CCGTCTCCCT GCTCGAGGTC GACGAGCGTC GACCCGGCGT ACGGGAGGCG GTGCAGGCCA CCCTCGACCT GCTCCGCGGC CTCGGCGTGG CCAACCTGCT CAACGACGAC TCGACCCGCC GCGCCGCACT GCTCACCGCC TGGAAACGCC AACTCACCGA GCTCCTCGCC CCCTGA
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Protein sequence | MSGTSTRVPQ QERSRATQTR LLEATVACLV EHGWSGTTTT VVATQAGVSR GAQLHHYPTK AALVTAAVAH LAERRAEELR AEAKTLPAGP QRLDRVVDLL AAAFTGPLFV AALELWVAAR TDRELRAALV PLEARLGREM HRLTVSLLEV DERRPGVREA VQATLDLLRG LGVANLLNDD STRRAALLTA WKRQLTELLA P
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