| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4320 |
|---|
| Symbol | |
|---|
| ID | 5060805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4892927 |
|---|
| End bp | 4894081 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640476582 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001161126 |
|---|
| Protein GI | 145596829 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2843] Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0878146 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGCCC ACTCCAACAC ATTGACGTTC GCCAGCCATG CGCGTCGGCT CCTGGCGGCC
GGCGCGCTGC TCGCCGTGCT GGTCGTTGCC GGTTGCGGTG CGACCGGCTC CGGTACGACC
GATTCCGGCG GGGCCTGGCA GCCCGGCGCC AGCAGTAGCG CACCCGCCCC CTCCCCCACC
GAGGCGGCGG CGGTCTCCCT CACCGCCACC GGCGACATCA TCCTGGGCAA CGCCCCGAAC
CGGCTGCCCC CCAAGGACGG CGAGGGCTTC TTCGACGAGG TGCGCCCGGA GCTCGCCGCC
GACCTGGCGA TGGGCAACCT GGAGGAGCCG CTCACCGTCG ATACCGGGAC CGGCAAGTGC
GGCGAGAACT CCACCAACTG CTACCAGTTC CGGGCCCCGC CGGAGTACGC GGCGCACCTG
CGCGACGGTG GGTTTGACCT GCTCAACCTG GCCAACAATC ACGGGAACGA CTTCGGCGCG
AAGGGCCTCC AGAACACCCG GCAGGCGCTT GAACAGTACG AACTGGCGCA CACCGGAGCG
CCGGATCAGA TCACCGTCGT TGACGTACGC GGTGTCCAGG TGGCGGTGGC GGGCTTCTCG
TCGTACGCGT GGTCGAACCC GCTGACCGAC ATCCCGGCGG CAAAGCAGGT CGTCACCAAG
GCCGCTGAGA TGGCGGATCT GGTGGTGGTT CAGGTGCACA TGGGCGCGGA AGGGGCCGAC
AAGACCCGGG TCAAACCGGG CACCGAGCTG TACCTGGGGG AGAACCGGGG CGATCCGGTC
CGGTTCGCCA AGGCCATGAT CGATGCGGGT GCGGATCTGA TCGTCGGGCA CGGCCCGCAC
GTCCTGCGCG GCATGGAGTT CTACCAGGGC CGGCTGATCG CGTACAGCCT CGGTAACTTC
GCTGGCGGCG GGAACACGCT CAGCCGCAGC GGCCGGCTCG GCTGGGGCGG CGTGCTCAAG
GTTTCGCTGC AGCCGGACGG CACCTGGGTC GGCGGGTCGT TCGCCTCGAC GTACCTGAAC
GGGTCGGGTC TGCCGACCTT GGACCCGGAC GACCGGGGCC TGGGGCTGGT GCGGGAGCTC
AGCGGTGCGG ACTTCCCGGA GACCGGTGCG ATCTTCGACG ACCTGGGTAA GATCAGCCCG
CCCCAGCCGG GTTGA
|
|---|
| Protein sequence | MRAHSNTLTF ASHARRLLAA GALLAVLVVA GCGATGSGTT DSGGAWQPGA SSSAPAPSPT
EAAAVSLTAT GDIILGNAPN RLPPKDGEGF FDEVRPELAA DLAMGNLEEP LTVDTGTGKC
GENSTNCYQF RAPPEYAAHL RDGGFDLLNL ANNHGNDFGA KGLQNTRQAL EQYELAHTGA
PDQITVVDVR GVQVAVAGFS SYAWSNPLTD IPAAKQVVTK AAEMADLVVV QVHMGAEGAD
KTRVKPGTEL YLGENRGDPV RFAKAMIDAG ADLIVGHGPH VLRGMEFYQG RLIAYSLGNF
AGGGNTLSRS GRLGWGGVLK VSLQPDGTWV GGSFASTYLN GSGLPTLDPD DRGLGLVREL
SGADFPETGA IFDDLGKISP PQPG
|
|---|
| |