Gene Strop_4319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4319 
Symbol 
ID5060804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4892084 
End bp4892914 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content71% 
IMG OID640476581 
Productendonuclease III 
Protein accessionYP_001161125 
Protein GI145596828 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.145875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCGGGC ACGAAGCGGG GACCGGCGGC CGGCGACGTA GGCTGGCCGG CGTGACCATC 
AGCCTCAGGG AGACCGACCT CGGTCGGACG CGCCGCGCCC GACGGATCGG CCGGGTGCTG
GCCGACACCC ACCCGGACGC GCACTGCGAG CTCGACCACT CCAACCCGTT GGAGCTGGCC
GCCGCGACGA TCCTCTCCGC CCAGTGCACG GACAAACGGG TCAACGAGGT CACCCCGAAG
GTGTTCGCCC GTTACCCGCA GGCGGCCGAC TACGCCGGCG CGGACCGGGC CGAGCTGGAG
GAGCTGATCC GGTCCACCGG CTTCTACCGC AACAAGGCGG ACTCCCTGAT CCGGCTGGGC
CAGGGGCTGG TCGAACGACA CGACGGCCAG GTGCCCGGGA AGCTGACCGA CCTGGTGTCC
CTGCCCGGAA TCGGCCGTAA GACGGCGAAC GTCATCCTCG GCAACGCGTT TGGCGTGCCG
GGAATCACCG TCGACACGCA CTTCAACCGG CTCGTACGGC GGTGGGGGCT GACAACCGAG
ACCGACCCGG TCAAGATCGA GCATGCGATC GGGGCGCTCT ATCCGAAGCG CGACTGGACG
ATGCTGTCGC ACCGGATCAT CTTCCACGGG CGGCGGGTCT GCCAGGCCCG AAAGCCGGCG
TGTGGCGCCT GCACTCTCGC GAAGCTCTGC CCGTCGTACG GGACCGGGCC GACCGAGCCG
GCGGTGGCCG CGCGGCTGCT CAAGGGTCCC CGGGCCCGGG ACCTCGCGGC GGCCGCCGGA
GTTGATCCGG AGCTGGTCCC GGACCAGGAC GGGTCGGTGG AGGCACGGTG A
 
Protein sequence
MRGHEAGTGG RRRRLAGVTI SLRETDLGRT RRARRIGRVL ADTHPDAHCE LDHSNPLELA 
AATILSAQCT DKRVNEVTPK VFARYPQAAD YAGADRAELE ELIRSTGFYR NKADSLIRLG
QGLVERHDGQ VPGKLTDLVS LPGIGRKTAN VILGNAFGVP GITVDTHFNR LVRRWGLTTE
TDPVKIEHAI GALYPKRDWT MLSHRIIFHG RRVCQARKPA CGACTLAKLC PSYGTGPTEP
AVAARLLKGP RARDLAAAAG VDPELVPDQD GSVEAR