Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4319 |
Symbol | |
ID | 5060804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4892084 |
End bp | 4892914 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640476581 |
Product | endonuclease III |
Protein accession | YP_001161125 |
Protein GI | 145596828 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.145875 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCGCGGGC ACGAAGCGGG GACCGGCGGC CGGCGACGTA GGCTGGCCGG CGTGACCATC AGCCTCAGGG AGACCGACCT CGGTCGGACG CGCCGCGCCC GACGGATCGG CCGGGTGCTG GCCGACACCC ACCCGGACGC GCACTGCGAG CTCGACCACT CCAACCCGTT GGAGCTGGCC GCCGCGACGA TCCTCTCCGC CCAGTGCACG GACAAACGGG TCAACGAGGT CACCCCGAAG GTGTTCGCCC GTTACCCGCA GGCGGCCGAC TACGCCGGCG CGGACCGGGC CGAGCTGGAG GAGCTGATCC GGTCCACCGG CTTCTACCGC AACAAGGCGG ACTCCCTGAT CCGGCTGGGC CAGGGGCTGG TCGAACGACA CGACGGCCAG GTGCCCGGGA AGCTGACCGA CCTGGTGTCC CTGCCCGGAA TCGGCCGTAA GACGGCGAAC GTCATCCTCG GCAACGCGTT TGGCGTGCCG GGAATCACCG TCGACACGCA CTTCAACCGG CTCGTACGGC GGTGGGGGCT GACAACCGAG ACCGACCCGG TCAAGATCGA GCATGCGATC GGGGCGCTCT ATCCGAAGCG CGACTGGACG ATGCTGTCGC ACCGGATCAT CTTCCACGGG CGGCGGGTCT GCCAGGCCCG AAAGCCGGCG TGTGGCGCCT GCACTCTCGC GAAGCTCTGC CCGTCGTACG GGACCGGGCC GACCGAGCCG GCGGTGGCCG CGCGGCTGCT CAAGGGTCCC CGGGCCCGGG ACCTCGCGGC GGCCGCCGGA GTTGATCCGG AGCTGGTCCC GGACCAGGAC GGGTCGGTGG AGGCACGGTG A
|
Protein sequence | MRGHEAGTGG RRRRLAGVTI SLRETDLGRT RRARRIGRVL ADTHPDAHCE LDHSNPLELA AATILSAQCT DKRVNEVTPK VFARYPQAAD YAGADRAELE ELIRSTGFYR NKADSLIRLG QGLVERHDGQ VPGKLTDLVS LPGIGRKTAN VILGNAFGVP GITVDTHFNR LVRRWGLTTE TDPVKIEHAI GALYPKRDWT MLSHRIIFHG RRVCQARKPA CGACTLAKLC PSYGTGPTEP AVAARLLKGP RARDLAAAAG VDPELVPDQD GSVEAR
|
| |