| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4312 |
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| Symbol | |
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| ID | 5060797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4884562 |
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| End bp | 4886343 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640476574 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_001161118 |
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| Protein GI | 145596821 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0705545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGAGGG AAGATTCACA CTACCGTCCG GAGCAGAGCA CTGGACGGGA GACCGGTAGA
TCTGCTCGTG GCAGTGCGGT CGGGCGGGTA CCGGTGCCCG AGGCCCACCC CGACCACCAG
CCCGCCGCCG GGCCGGAACA GGGTACGTCG CCGGACCGAC CCAGCCCGGC CGAGTTGACG
CCGGCGGATG GCGAGGCCGC CTGCTTCCCC GCCCCCGGAG ATTCCGACGA ACCCACTCCG
GCCTCGCATG GTGAACCTGA TGAGCCTGCT CGGAACTCGG CCGGTGAGCC GGGCGAACCC
GCGGGCCACG GCGACAGCCG CGCCCCCGTA CCGTCCGGCG CGACCTCGCC CGGTCGGTCC
CGGCGCTGGT TGCTACCGGC TGTGCTGGCC TCGGTGGGGC TCCTCGCGCT GGCCGCTGTC
GGGGTCACCG TGGCGCGATC GGGCCCGGTG GCCCAGTGGC ATGACGGCGG GGCCGACGGG
CAGTCCGCCG TGGAGCCGCC GCCGGCGGTG CTGGCCGTGG CCGACGTGAA CGCGCCCGAA
CCCGCCGCCG CCGGGGTGCG CGCCGCGCTC GACCCGCTGG TCAACTCCGC CGCTTTGGGT
GACCGGGTCA ACGTCTCGGT CACCGACGTC GCCAGCGGGG CGATCCTGTA TGACCAGGGC
GCTGCCGACG GCACCGTACC CGCCTCCGTG ACCAAACTGG TCACCGCCGC GACCGTGCTC
GCCGCGCGCG ACCCGGGGCA CCGGATCCCC ACCCGGGCCG TCGCCGGGGC GGCCCCCGGC
GAGGTCGTGC TCATCGGCGG GGGTGACCCG ACCCTCGCTG TGGACGGTAC CGGCTTCTAC
CCGGGTGCCG CGCGTCTCGA TGAGCTGGCC GCGCAGGTGA AGACCGCGCT CGGCGGCGTC
GCCCCGACGC GGGTCGTGGT CGACTCGTCG CTGTACTCCG GGCCGGTTCA CGAACCCGGC
TGGGACGACG ACATCCTCTC CGAGGGATAC GGCGCGGCGA TCACCGCGTT GATGACCGAC
GGCGCCCGCA GCGACCTGGA GCAGGCGAAG CGGGACCACG ACGACGGTAG ACATGCCGCC
AAACGGGTGA AGGAGCCGGA CCTGCACGCC GGCGCGGCGT TTGCCCAGCT GCTGGGCGTA
CCGACGGGCG CGGTCGAGCG GGGAACGGCA CCCGAGGCCG GTGCGGATGC GACGGCGGGT
GCGCCGGGCA GTGAGCTGGG TGTGGTCGAG TCGCTGCCGA TGGTGCGACT GGTCGACATC
ATGATCAGCG ACAGCGACAA CGTGGTGGCC GAGGTCCTGG CCCGGCAGGT GGCTCTCGCC
CGGGGGCAGC CGGCGTCGTT CTCCGGCGCG GCGGAGTCGA TGCGGGCGGT CGCGGGGGAG
CTGGGGCTGC CGGTCGCCGC GCTCACGCTC GCCGACGGCA GCGGCCTGTC CCGCGCCAAC
CGGATCAGCC CGTCGCTGCT CACCGACCTG GTCCGGCTCG CCGCCGACGG CAGCCGTCCG
GAGCTGGCGA CGCTCTTCGG CGGTCTGCCG GTCGCCGCCT GGTCGGGCAC CCTCACCAAG
CGCTACACCG ATGTCGCGGC TCAGGCCGGT GCCGGGATGG TCCGCGCCAA GACCGGAACG
CTGACCGGGG TGCACGCGAT CGCCGGGTTG GTGACCACCG CCGACGGCCG GCTGCTCGCC
TTCGCGGTGC TCACCGACCG GGCGCCCGAC GACGGGCTGA CGGCGGCCCG GGTGGCGTTG
GACCGGATCA CCGCCGCCCT CGCCGCCTGC GGCTGCCGCT GA
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| Protein sequence | MGREDSHYRP EQSTGRETGR SARGSAVGRV PVPEAHPDHQ PAAGPEQGTS PDRPSPAELT
PADGEAACFP APGDSDEPTP ASHGEPDEPA RNSAGEPGEP AGHGDSRAPV PSGATSPGRS
RRWLLPAVLA SVGLLALAAV GVTVARSGPV AQWHDGGADG QSAVEPPPAV LAVADVNAPE
PAAAGVRAAL DPLVNSAALG DRVNVSVTDV ASGAILYDQG AADGTVPASV TKLVTAATVL
AARDPGHRIP TRAVAGAAPG EVVLIGGGDP TLAVDGTGFY PGAARLDELA AQVKTALGGV
APTRVVVDSS LYSGPVHEPG WDDDILSEGY GAAITALMTD GARSDLEQAK RDHDDGRHAA
KRVKEPDLHA GAAFAQLLGV PTGAVERGTA PEAGADATAG APGSELGVVE SLPMVRLVDI
MISDSDNVVA EVLARQVALA RGQPASFSGA AESMRAVAGE LGLPVAALTL ADGSGLSRAN
RISPSLLTDL VRLAADGSRP ELATLFGGLP VAAWSGTLTK RYTDVAAQAG AGMVRAKTGT
LTGVHAIAGL VTTADGRLLA FAVLTDRAPD DGLTAARVAL DRITAALAAC GCR
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