Gene Strop_4311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4311 
Symbol 
ID5060796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4883384 
End bp4884454 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content71% 
IMG OID640476573 
Producthypothetical protein 
Protein accessionYP_001161117 
Protein GI145596820 
COG category[S] Function unknown 
COG ID[COG5282] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03624] putative hydrolase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.107455 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGT TCGTGGACTG GGATCTGGCC GCAGCGACCG CCGGGACGCT CGGCAAGACG 
GGCCCGCGCG TCTCCTATGT CGAGGCCACG GCGGTCGTCG GCGACCTGCG ACAGCTGACC
GACGAGGCGG CCGAGCACGT CGCCGACTTC ACCGGGCTCC GATCGCAGGT GTCACACCCG
CCGGTGCAGG TGGTCGACCG GCGGGACTGG GCAGCGACCA ACGTCGCCGG TCTGCGCGAG
GTTATCGGCC CCCTGGTCGG TCGTCTCGCG GGAGACAAGC AGCCCAGTGT GTTGACCGAG
GCGATCGGTT CGCGGATCAC CGGCGTGCAG GCCGGTACGG TGCTGGCATA CCTCTCCGGC
CGGGTCCTCG GCCAGTACGA GGTCTTCTCC GGCGAACCGG GCCAGCTGCT GTTGATCGCG
CCGAACATCG TCGAGGTGGA GCGGAAGCTG GCGGCCGACC CCCGCGACTT TCGGCTCTGG
GTCTGTCTGC ACGAGGTCAC CCACCGCACC CAGTTCACGG CGGTGCCGTG GCTGCGGGCC
TACTTTCTCG GTGAGGTGCA GGCGTTCGTC GACGCCTCCA GCAGCGGCGG CGAGCCCCTG
GTCGAGCGGC TGCGCCGCGG TATCACCGTC CTCGCCGACG CGGTGCGGGA GCCGGCCGGT
CGCACCAGTG TCCTGGACAT CGTCCAGACC CCGGCGCAGA AGGCGGTGCT GGACCGGCTC
ACCGCGCTGA TGACTCTGCT CGAGGGGCAC GCCGAGTTCG TGATGGATGG CGTGGGGCCG
CAGGTGATCC CGAGTGTGGA GCGGATCCGG GCGTCGTTCA ACCGCCGTCG GGAGTCGGGC
AACCCACTGG AGAAGGCGCT CCGTCGGCTA CTCGGGGTGG AGGTCAAGCT GCGCCAGTAC
GCCGAGGGGC GGAGCTTCGT CCACGGGGTG GTCGAGCGGG TCGGCATGGA GGGCTTCAAC
CGGGTCTTCG CCTCACCGCT GACCCTGCCC CGGCTTGCCG AGCTCAGCGA CCCGGACGCC
TGGGTGGCCC GGGTGCACGG GCCGGCCGGT CCGCTCCCGG CCGGCGACTG A
 
Protein sequence
MAQFVDWDLA AATAGTLGKT GPRVSYVEAT AVVGDLRQLT DEAAEHVADF TGLRSQVSHP 
PVQVVDRRDW AATNVAGLRE VIGPLVGRLA GDKQPSVLTE AIGSRITGVQ AGTVLAYLSG
RVLGQYEVFS GEPGQLLLIA PNIVEVERKL AADPRDFRLW VCLHEVTHRT QFTAVPWLRA
YFLGEVQAFV DASSSGGEPL VERLRRGITV LADAVREPAG RTSVLDIVQT PAQKAVLDRL
TALMTLLEGH AEFVMDGVGP QVIPSVERIR ASFNRRRESG NPLEKALRRL LGVEVKLRQY
AEGRSFVHGV VERVGMEGFN RVFASPLTLP RLAELSDPDA WVARVHGPAG PLPAGD