Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4311 |
Symbol | |
ID | 5060796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4883384 |
End bp | 4884454 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640476573 |
Product | hypothetical protein |
Protein accession | YP_001161117 |
Protein GI | 145596820 |
COG category | [S] Function unknown |
COG ID | [COG5282] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03624] putative hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.107455 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCAGT TCGTGGACTG GGATCTGGCC GCAGCGACCG CCGGGACGCT CGGCAAGACG GGCCCGCGCG TCTCCTATGT CGAGGCCACG GCGGTCGTCG GCGACCTGCG ACAGCTGACC GACGAGGCGG CCGAGCACGT CGCCGACTTC ACCGGGCTCC GATCGCAGGT GTCACACCCG CCGGTGCAGG TGGTCGACCG GCGGGACTGG GCAGCGACCA ACGTCGCCGG TCTGCGCGAG GTTATCGGCC CCCTGGTCGG TCGTCTCGCG GGAGACAAGC AGCCCAGTGT GTTGACCGAG GCGATCGGTT CGCGGATCAC CGGCGTGCAG GCCGGTACGG TGCTGGCATA CCTCTCCGGC CGGGTCCTCG GCCAGTACGA GGTCTTCTCC GGCGAACCGG GCCAGCTGCT GTTGATCGCG CCGAACATCG TCGAGGTGGA GCGGAAGCTG GCGGCCGACC CCCGCGACTT TCGGCTCTGG GTCTGTCTGC ACGAGGTCAC CCACCGCACC CAGTTCACGG CGGTGCCGTG GCTGCGGGCC TACTTTCTCG GTGAGGTGCA GGCGTTCGTC GACGCCTCCA GCAGCGGCGG CGAGCCCCTG GTCGAGCGGC TGCGCCGCGG TATCACCGTC CTCGCCGACG CGGTGCGGGA GCCGGCCGGT CGCACCAGTG TCCTGGACAT CGTCCAGACC CCGGCGCAGA AGGCGGTGCT GGACCGGCTC ACCGCGCTGA TGACTCTGCT CGAGGGGCAC GCCGAGTTCG TGATGGATGG CGTGGGGCCG CAGGTGATCC CGAGTGTGGA GCGGATCCGG GCGTCGTTCA ACCGCCGTCG GGAGTCGGGC AACCCACTGG AGAAGGCGCT CCGTCGGCTA CTCGGGGTGG AGGTCAAGCT GCGCCAGTAC GCCGAGGGGC GGAGCTTCGT CCACGGGGTG GTCGAGCGGG TCGGCATGGA GGGCTTCAAC CGGGTCTTCG CCTCACCGCT GACCCTGCCC CGGCTTGCCG AGCTCAGCGA CCCGGACGCC TGGGTGGCCC GGGTGCACGG GCCGGCCGGT CCGCTCCCGG CCGGCGACTG A
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Protein sequence | MAQFVDWDLA AATAGTLGKT GPRVSYVEAT AVVGDLRQLT DEAAEHVADF TGLRSQVSHP PVQVVDRRDW AATNVAGLRE VIGPLVGRLA GDKQPSVLTE AIGSRITGVQ AGTVLAYLSG RVLGQYEVFS GEPGQLLLIA PNIVEVERKL AADPRDFRLW VCLHEVTHRT QFTAVPWLRA YFLGEVQAFV DASSSGGEPL VERLRRGITV LADAVREPAG RTSVLDIVQT PAQKAVLDRL TALMTLLEGH AEFVMDGVGP QVIPSVERIR ASFNRRRESG NPLEKALRRL LGVEVKLRQY AEGRSFVHGV VERVGMEGFN RVFASPLTLP RLAELSDPDA WVARVHGPAG PLPAGD
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