| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4308 |
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| Symbol | |
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| ID | 5060793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4879290 |
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| End bp | 4881305 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640476570 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_001161114 |
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| Protein GI | 145596817 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.066161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGTA CGCGTTTCTT CCGCCGACCG GTGGTCTGGG TCCTCCTGGT CATCCTCGGC
GCCGTTTTGC TCAGTCAGCT GTTCACCGGG GGCCCCGACT ACCACCGGGT GGAAACCTCC
GTTGCGCTGG ACCAGCTCAA CAAGGGTGGC ATCGAGAAGG TCGTCTACGC GGACAAGGAG
CAGACGCTCC AGCTCGACCT TGCCGAGCCG GCCGAGTTCG GGGAGGACAA CACGTCCACC
GACCGAATCG AGGCGCAGTT CCCGTACGAG GTCGGCGCCG AGGTCTGGAA CGAGGTCCGC
GACGCCGAGG CGAACAACCG CATCACCGGT ACGGCCGACA CGGAGGTCTC GCGCGACAGC
ATCTGGGTGA GCCTGCTGCT CAACCTGCTC CCCATCGTGC TGCTGGTGCT CCTGCTGCTG
TTCTTCATGT CGCAGATGCA GGGCGGCGGC TCGCGGGTGC TCAACTTTGG CAAGTCCAAG
GCCAAGATGA TCACCAAGGA CACGCCGAAG ACGACCTTCG CCGACGTGGC GGGCTCCGAG
GAGGCCGTCG AGGAACTGCA CGAGATCAAG GACTTCCTGC AGAACCCGGC GAAGTACCAG
GCGCTCGGCG CCAAGATCCC GAAGGGCGTG CTGCTCTTCG GCCCGCCTGG CACCGGTAAG
ACCCTGCTGG CCCGCGCGGT CGCCGGGGAG GCCGGCGTGC CCTTCTACTC CATCTCCGGC
TCGGACTTCG TCGAGATGTT CGTCGGTGTC GGCGCCAGCC GGGTCCGGGA CCTCTTCGAG
CAGGCCAAGA CGAACGCGCC GGCGATCGTC TTCGTGGACG AGATCGACGC GGTCGGCCGC
CACCGGGGCG CCGGCATGGG CGGCGGTCAC GACGAGCGTG AGCAGACCCT CAACCAGCTC
CTCGTCGAGA TGGACGGCTT CGACACCAAG GGCGGCGTCA TCCTGATCGC CGCCACCAAC
CGGCCGGACA TCCTCGACCC GGCGCTGCTG CGGCCGGGCC GCTTCGACCG GCAGATCCCG
GTCGACGCAC CGGACATGGA GGGCCGCAAG GCGATCCTGC GGGTGCACGC CAAGGGCAAG
CCGTTCACCC CCGACGTCGA TCTCGACGCC GTGGCGCGGC GTACCCCGGG CTTCAGCGGC
GCCGACCTGG CCAACGTGAT CAACGAGGCC GCACTGCTCA CCGCCCGCCG GGACAAGCGG
GCGATCACCG ACGACGCCCT GGAGGAGTCG ATCGACCGGG TGATCGCCGG CCCCCAGCGC
CGTACCCGGG TGATGAGCGA CAACGAGAAG AAGATCACGG CGTACCACGA GGGCGGGCAC
GCGTTGGTCG CCTGGGCGTT GCCGCACGCC GCTCCGGTGC ACAAGGTCAC CATCCTGTCC
CGGGGCCGGT CACTGGGGCA CACCCTGGTC CTGCCAACCG AGGACAAGTA CACCCAGACG
CGGGCCGAGA TGGTCGACAC CCTGGCCTAC GCGCTGGGTG GCCGGGCCGC CGAGGAGCTG
GTGTTCCACG AGCCGACCAC CGGTGCCGGC AACGACATCG AGAAGGCCAC CCAGCTGGCC
CGCGCGATGA TCACGCAGTA CGGGATGAGT TCCAAGCTCG GTGCGATCAA GTACGGCAGC
AGCGGTGACG AGCCGTTCCT CGGCCGCAAC ATGGGCAATG AGCGGGGTTA CTCCGACGCC
GTCGCCGCCG AGATCGACGC CGAGATGCGG GCCCTGATCG AGCTGGCGCA CGACGAGGCC
TGGGAGATCC TGGTCGAGTA CCGCGATGTC CTGGACAACA TCGTGCTCGA GCTGATGGAG
AAGGAGACCC TCTCCACGGC CGACATGGCC CGGATCTGCG ACCGGGTGGC GAAGCGTCCG
CCGATGGCCC CATACAACGG GTTCGGCAAA CGCCAGCCCT CCACCGAGCC GCCGGTTCGC
ACGCCGGCCG AGAACGAGGC GCTCAAGGCG CAGGGCTCGG CCGACACCGC GTCCATCGGC
GGTGCCGCCT CGAACAACTC GGACGGTCCG CACTGA
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| Protein sequence | MERTRFFRRP VVWVLLVILG AVLLSQLFTG GPDYHRVETS VALDQLNKGG IEKVVYADKE
QTLQLDLAEP AEFGEDNTST DRIEAQFPYE VGAEVWNEVR DAEANNRITG TADTEVSRDS
IWVSLLLNLL PIVLLVLLLL FFMSQMQGGG SRVLNFGKSK AKMITKDTPK TTFADVAGSE
EAVEELHEIK DFLQNPAKYQ ALGAKIPKGV LLFGPPGTGK TLLARAVAGE AGVPFYSISG
SDFVEMFVGV GASRVRDLFE QAKTNAPAIV FVDEIDAVGR HRGAGMGGGH DEREQTLNQL
LVEMDGFDTK GGVILIAATN RPDILDPALL RPGRFDRQIP VDAPDMEGRK AILRVHAKGK
PFTPDVDLDA VARRTPGFSG ADLANVINEA ALLTARRDKR AITDDALEES IDRVIAGPQR
RTRVMSDNEK KITAYHEGGH ALVAWALPHA APVHKVTILS RGRSLGHTLV LPTEDKYTQT
RAEMVDTLAY ALGGRAAEEL VFHEPTTGAG NDIEKATQLA RAMITQYGMS SKLGAIKYGS
SGDEPFLGRN MGNERGYSDA VAAEIDAEMR ALIELAHDEA WEILVEYRDV LDNIVLELME
KETLSTADMA RICDRVAKRP PMAPYNGFGK RQPSTEPPVR TPAENEALKA QGSADTASIG
GAASNNSDGP H
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