| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4288 |
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| Symbol | |
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| ID | 5060773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4858226 |
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| End bp | 4859359 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640476550 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001161094 |
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| Protein GI | 145596797 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.591163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGAAGT CCGACGGAGT TTGTCGTACC CGTCGCGAAG ATGTTGGGTG GGAACGCGGG
CGGCACCGAT CGCCCGTCGG ACACGCGGCC GGCGCAGGAG CCGTGCCGGG ACACGGAAGG
CGGGCAGACA TGCACGCACG CACACGTTTG GCGATCGGCG CTGTCGGCGT CCTGACCACG
GCCGGGCTCT TGACCGGCTG CGGCGAGGCC GGTTCGTCGG GCACGGACGC GCCCGAAACG
GCGGCGGCGG GGGAAGGATG CGCCCCGGTG GCCGGCGACG AGCTGGTCGT GCTGACCGAC
GACAAGTCGC TGCAGAACAG CGACAACATC ATCCCCGTGG TCAATGCCGA CGCCGCGACC
CCGCCGCTCA TCGCCGCCCT GGACCAGGTC TCCGCGGTGC TGGACACGCC GAAGCTGATC
CAGCTCAACA AGGCCGTCAA CGAGGACCGC AAGACGCCCG CGGTCGCGGC GGCCGAGTTC
GCCACCGCCA ACGACCTCAC CGCCGGCCTC GCGAAGGGGC CCGGCGGCAC GATCACGGTC
GGGGCCGCCA ACTTCAGCGA GAGCGAGACC CTCGCCGAGC TGTACAAGAT CGTGTTGGTC
GCCGCCGGCT ACGAGGTCGA GGTGCAGCAA ATCGGCAGCC GTGAACTCTA CGAGCCCGCC
CTGGAGAAGG GCGAGATCCA CGTCTTCCCC GAGTACGCGG CCACCCTGGC CGAGTTCCTC
AACACGAAGG CGAACGGCGA GGGCGCCGAG CCGGTCTCCT CGCCGGACCT GGACGAGACG
GTCGCCGCGC TGAAGGTGCT CGGCGCGGAG GCCAACCTGG CCCTCGGCGC GCCCGCCGCG
GCCCAGAACC AGAACGCCTT CGCGGTCACG CGGGCCTTCG CCGACAAGCA CGGCGTGCAG
ACCCTCACCG AGCTGGCCGA GAAGTGCTCT GGTCAGGAGA CCGTCCTGGC GGGACCGCCG
GAGTGCCCGC AGCGGCCGAA GTGCCAGGCC GGGCTGGTCG AGGTCTATGA CTTCCGGGCC
GGGTCGTTCA GCTCCCTTGA TGCCGGCGGA CCGCAGACGA AGAATGCCCT GAGGACCGGC
GTCGCCAGTG TGGGTCTGGT GTTCTCCTCC GACGGAGCCC TCACCGTCGG CTGA
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| Protein sequence | MTKSDGVCRT RREDVGWERG RHRSPVGHAA GAGAVPGHGR RADMHARTRL AIGAVGVLTT
AGLLTGCGEA GSSGTDAPET AAAGEGCAPV AGDELVVLTD DKSLQNSDNI IPVVNADAAT
PPLIAALDQV SAVLDTPKLI QLNKAVNEDR KTPAVAAAEF ATANDLTAGL AKGPGGTITV
GAANFSESET LAELYKIVLV AAGYEVEVQQ IGSRELYEPA LEKGEIHVFP EYAATLAEFL
NTKANGEGAE PVSSPDLDET VAALKVLGAE ANLALGAPAA AQNQNAFAVT RAFADKHGVQ
TLTELAEKCS GQETVLAGPP ECPQRPKCQA GLVEVYDFRA GSFSSLDAGG PQTKNALRTG
VASVGLVFSS DGALTVG
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