Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4277 |
Symbol | |
ID | 5060762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4845769 |
End bp | 4847277 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640476539 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_001161083 |
Protein GI | 145596786 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.654573 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGAGC AGAACGCCGT ACCAGTTGAC CCCGCCGACG ACCTTCCGGA GCAGATGAAG GTCCGCCGGG AGAAGCGGGA CCGGATGCTC GCCGAGGGGA TCGAACCCTA TCCGCTTGGG TATCCGCGGA CCCGCACGAT CGCCGAGATC CGCCAGGGGT ACGCCGACCT GCCCACTGAC ACGGCCACCG GTGACCAGGT GTCGGTCACC GGGCGGGTGA TCTTTATGCG GAACACCGGC AAGCTCTGCT TCGCCACGCT GCGGGACGGC GACGGCACCG AGCTGCAGGC GATGCTCTCC CTGGACCGGG TCGGCGCGCA GCGGCTTGAG GACTGGAAGC GGCTGGTGGA CCTCGGTGAC CTCGTCGGGG TAACCGGTGA GGTGATCACC AGCCGGCGTG GGGAGCTGTC GGTGCTGGCG CAGGGGTGGG CGGTCACCGC GAAGGCCCTT CGTCCGCTGC CGGTGGCGCA CAAGCCGCTC AGTGAGGAGG CCCGGGTCCG GCAGCGCTAC GTCGACCTCA TCGTTCGCCC GCAGGCCCGG CAGATGGTTC GTACCCGGGC GACCGCGGTT CGTAGCCTGC GGGAGTCCCT GCACGAGCGG GGCTTCCTCG AGGTGGAGAC CCCGATGCTG CAGCTGCTGC ACGGCGGTGC GACCGCTCGC CCATTCGTGA CTCACAGCAA TGCGCTCAGC ACCGATCTGT ATCTACGAAT CGCTCCGGAA CTATTTCTCA AGCGCGCGCT CGTTGGTGGC GTAGACCACG TCTTCGAGAT CAACCGTAAC TTCCGCAATG AGGGCGTTGA CTCATCGCAC TCGCCGGAGT TCGCGATGCT CGAGGCTTAC CAGGCGTATG GCGACTACGA CACGATCGGC GAGTTGACCC GTCATCTCAT CCAGCAGGCG GCGCTCGCGG TCGGCGGCTC GACGGTGGTG ACCCACGCGG ACGGTCGTGA GTTCGACCTC GGCGGTGAGT GGCGTTCGGT GACGCTGTTC GGTGCCCTTT CCGAAGCGCT CGGAGAGGAG GTCACGGTAC GCACGGAGCG GACCCGTCTG GTCGAGTACG CGGACAAGGT GGACTTGGCG GTCGACCCGA AGTGGGGTCC GGGCAAGCTG GCCGAGGAAC TGTTCGAGGA GTTGGTCGTC CCGGGTCTGC TGGCGCCCAC CTTCGTGCGG GACTATCCCG AGGAGACCAG CCCGTTGGTC CGGGCGCACC GCACCGAGCC GGGCCTGACC GAGAAGTGGG ACCTCTACGT ACTCGGCTTC GAACTGGGTA CGGGCTACTC CGAGTTGGTG GATCCGGTGG TTCAGCGGGA GCGTCTGGTG GCCCAGGCGC GGCTCGCGGC GCGGGGCGAC GACGAGGCGA TGCGGCTCGA CGAGGACTTT CTCCGGGCCC TGGAGTACGG AATGCCACCG TCTGGTGGTA TGGGAATGGG AATCGACCGG CTGCTCATGG CGCTGACCGG CCTGGGAATT CGGGAAACCA TCCTCTTCCC GCTGGTCCGA CCCGAGTGA
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Protein sequence | MTEQNAVPVD PADDLPEQMK VRREKRDRML AEGIEPYPLG YPRTRTIAEI RQGYADLPTD TATGDQVSVT GRVIFMRNTG KLCFATLRDG DGTELQAMLS LDRVGAQRLE DWKRLVDLGD LVGVTGEVIT SRRGELSVLA QGWAVTAKAL RPLPVAHKPL SEEARVRQRY VDLIVRPQAR QMVRTRATAV RSLRESLHER GFLEVETPML QLLHGGATAR PFVTHSNALS TDLYLRIAPE LFLKRALVGG VDHVFEINRN FRNEGVDSSH SPEFAMLEAY QAYGDYDTIG ELTRHLIQQA ALAVGGSTVV THADGREFDL GGEWRSVTLF GALSEALGEE VTVRTERTRL VEYADKVDLA VDPKWGPGKL AEELFEELVV PGLLAPTFVR DYPEETSPLV RAHRTEPGLT EKWDLYVLGF ELGTGYSELV DPVVQRERLV AQARLAARGD DEAMRLDEDF LRALEYGMPP SGGMGMGIDR LLMALTGLGI RETILFPLVR PE
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