| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4275 |
|---|
| Symbol | |
|---|
| ID | 5060760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4842348 |
|---|
| End bp | 4844882 |
|---|
| Gene Length | 2535 bp |
|---|
| Protein Length | 844 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640476537 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_001161081 |
|---|
| Protein GI | 145596784 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.219573 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAGC GGTTCACCGA CCGAGCGCGT CGGGTTGTCG TCCTGGCCCA GGAAGAGGCC
CGGATGCTCA ACCACAATTA CATTGGTACT GAGCACATTC TGCTGGGCCT GATCCACGAG
GGTGAGGGCG TGGCCGCCAA GGCGCTGGAG AGTCTGGGGA TCTCTCTGGA GGGCGTGCGA
CAGCAGGTTG AGGAGATCAT CGGGCAGGGC CAGCAGGCGC CGAGTGGTCA CATTCCGTTC
ACCCCGCGGG CCAAGAAGGT GCTGGAGCTG TCACTGCGGG AGGCGCTGCA GCTTGGGCAC
AACTACATCG GTACCGAGCA CATTCTGCTG GGCCTGATCC GTGAGGGTGA GGGCGTGGCG
GCTCAGGTGC TGGTGAAGTT GGGGGCGGAC CTCAATCGGG TCCGTCAGCA GGTGATCCAG
CTGCTGTCGG GCTATCAGGG CAAAGAGCCG GCGGCGGCGG GGACAGCGCC AGGCGAGGCC
GCTCCGTCGA CGAGCTTGGT GTTGGACCAG TTCGGTCGCA ATCTCACGCA GGCGGCTCGT
GAGGGCAAGC TTGATCCGGT TATCGGTCGG GAAAAAGAGA TCGAGCGGGT CATGCAGGTG
CTGTCCCGGC GGACGAAGAA CAACCCGGTG CTGATCGGTG AGCCGGGTGT GGGCAAGACC
GCCGTGGTGG AGGGCCTGTC GCAGCGGATC GTCAAGGGCG AGGTGCCCGA GACGCTGAAG
GACAAGCAGC TGTACACCCT TGACCTGGGT GCTTTGGTAG CGGGTTCACG GTATCGGGGT
GACTTCGAGG AGCGGTTGAA GAAGGTCCTC AAGGAGATCC GTACCCGTGG TGACATCATC
CTGTTCATTG ATGAGATCCA CACGTTGGTG GGCGCGGGTG CCGCCGAGGG TGCGATCGAC
GCGGCGAGCA TTCTGAAGCC GATGCTGGCG CGGGGTGAGT TGCAGACCAT CGGCGCGACG
ACGCTGGATG AGTACCGCAA GCACCTGGAG AAGGACGCCG CGTTGGAACG CCGGTTCCAG
CCCATCCAGG TGGGTGAGCC GTCGTTGCCG CACACCATTG AGATCCTGAA GGGTCTGCGG
GACCGCTACG AGGCGCACCA CCGTGTGTCG ATCACGGATG CGGCCCTGGT GGCGGCGGCA
ACCCTCGCTG ACCGCTACAT CTCGGATCGA TTCCTGCCGG ACAAGGCCAT CGACTTGATC
GATGAGGCGG GCGCGCGGAT GCGGATCCGG CGGATGACCG CGCCGCCAGA CCTGCGGGAC
TTCGATGAGC GGATCGCGCA GGTGCGTCGG GACAAGGAGT CCGCGATCGA CGCGCAGGAC
TTCGAACGAG CCGCGCAGCT GCGGGACACC GAGAAGCAGC TGCTGGGCCA GAAGGCGCAG
CGGGAGAAGG AGTGGAAGGC CGGTGATCTG GATGTCGTCA CCGAGGTCGA CGACGAGCAG
ATCGCCGAGG TGCTCGGTAA CTGGACGGGC ATCCCGGTCT ACAAGCTGAC CGAGGAGGAG
ACCTCCCGGC TGCTGCGGAT GGAAGACGAG CTGCACAAGC GGGTCATTGG CCAGGAAGAC
GCGGTCAAGG CGGTGTCGAA GGCGATCCGC CGCACGCGGG CCGGCCTGAA GGACCCGAAG
CGGCCGTCTG GGTCGTTCAT CTTCGCGGGT CCGTCCGGGG TCGGTAAGAC CGAGTTGTCC
AAGGCCCTCG CGGAGTTCCT CTTCGGCAGC GAAGACGCGT TGATCCAGCT GGACATGTCC
GAGTTCCACG ACCGGTACAC GGTGTCCCGG CTCGTCGGTG CGCCTCCCGG CTACGTCGGC
TACGACGAGG GCGGGCAGCT GACCGAGAAG GTCCGCCGGC GGCCGTTCAG CGTGGTCCTC
TTCGACGAAA TCGAGAAGGC CCACCCGGAC GTGTTCAACA CGCTGCTGCA GATCCTCGAG
GACGGGCGGC TCACCGACGG TCAGGGCCGG ATCGTGGACT TCAAGAACAC GGTCATCATC
CTGACAACCA ACCTCGGTAC CCGCGACGTC GCCAAGGCGG TCTCGCTGGG CTTCCAGGCC
TCTGATGACT CCGACTCGAA CTACGACCGG ATGAAGCAGA AGGTCAACGA CGAGCTCAAG
CAGCACTTCC GGCCGGAGTT CCTCAACCGG ATCGACGACA CCATCGTCTT CCACCAGCTG
CGCCACCGGG AGATCCTCTC GATCGTCGAT ATCATGATCG GTCGGATCGA GACCCAGCTG
CGCAACAAGG ACATGGGCCT GGAGCTCACC GACAACGCCA AGCAGTACCT CGCGACGAAG
GGCTTCGACC CCGTCCTCGG TGCCCGGCCG CTACGCCGCA CGATCCAGCG GGACATCGAG
GACAACCTCT CCGAGCGGAT CCTGTTCAAC GAGCTCAACC CCGGCCAGAT CGTCATCGTC
GACTGCGACG GTGATCCGAC CAATATCGAT TCGTCCACCC TCACCTTCCG CGGCACCGAC
AAACCGGCAG ACCTGCCGGA CGCGGTCCCA GCCGACCTCG GCGGCGCTGC CACGGGGGCG
GACGACACGG CGTAG
|
|---|
| Protein sequence | MFERFTDRAR RVVVLAQEEA RMLNHNYIGT EHILLGLIHE GEGVAAKALE SLGISLEGVR
QQVEEIIGQG QQAPSGHIPF TPRAKKVLEL SLREALQLGH NYIGTEHILL GLIREGEGVA
AQVLVKLGAD LNRVRQQVIQ LLSGYQGKEP AAAGTAPGEA APSTSLVLDQ FGRNLTQAAR
EGKLDPVIGR EKEIERVMQV LSRRTKNNPV LIGEPGVGKT AVVEGLSQRI VKGEVPETLK
DKQLYTLDLG ALVAGSRYRG DFEERLKKVL KEIRTRGDII LFIDEIHTLV GAGAAEGAID
AASILKPMLA RGELQTIGAT TLDEYRKHLE KDAALERRFQ PIQVGEPSLP HTIEILKGLR
DRYEAHHRVS ITDAALVAAA TLADRYISDR FLPDKAIDLI DEAGARMRIR RMTAPPDLRD
FDERIAQVRR DKESAIDAQD FERAAQLRDT EKQLLGQKAQ REKEWKAGDL DVVTEVDDEQ
IAEVLGNWTG IPVYKLTEEE TSRLLRMEDE LHKRVIGQED AVKAVSKAIR RTRAGLKDPK
RPSGSFIFAG PSGVGKTELS KALAEFLFGS EDALIQLDMS EFHDRYTVSR LVGAPPGYVG
YDEGGQLTEK VRRRPFSVVL FDEIEKAHPD VFNTLLQILE DGRLTDGQGR IVDFKNTVII
LTTNLGTRDV AKAVSLGFQA SDDSDSNYDR MKQKVNDELK QHFRPEFLNR IDDTIVFHQL
RHREILSIVD IMIGRIETQL RNKDMGLELT DNAKQYLATK GFDPVLGARP LRRTIQRDIE
DNLSERILFN ELNPGQIVIV DCDGDPTNID SSTLTFRGTD KPADLPDAVP ADLGGAATGA
DDTA
|
|---|
| |