| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4270 |
|---|
| Symbol | |
|---|
| ID | 5060755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 4838019 |
|---|
| End bp | 4839194 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640476532 |
|---|
| Product | DNA integrity scanning protein DisA |
|---|
| Protein accession | YP_001161076 |
|---|
| Protein GI | 145596779 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1623] Predicted nucleic-acid-binding protein (contains the HHH domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0977721 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGATCG ACCGCGACAC CACCAAGCCT GCCGGCGCGA CACCTCACGC CCGCACCGGT
GCCGTGGGTT CGCCCGCCCG TCCGATCAGC GTGCACGTGA CCGGAGGCGC GGCCAGCGAC
CCGCTGCGCG CCAACCTGGC CCTGATGGCA CCCGGCACCG CCCTGCGCGA CGGGCTGGAG
CGGATCCTTC GGGGACGCAC CGGCGCCCTG ATCGTCCTCG GCTATGACAA GGTCGTCGAG
AGCCTCTGCA CCGGCGGCTT CCCGCTCGAC GTGGAGTTCT CCGCCACCCG CGTACGCGAG
CTGTGCAAAA TGGATGGCGC TGTCGTGCTC TCCAGCGACG GAAGCCGGAT CGTCCGGGCG
GCAGTGCATC TGATGCCCGA TCCCGCGATC CCCACCGAGG AGTCCGGCAC CCGGCACCGC
ACCGCCGAGC GGGTTGCCCG TCAGACCGGC TACCCGGTCA TCTCGGTGAG CCAGTCCATG
CGAATCATCA GCCTCTACGT CAACGGCCAG CGGCACGTGC TGGACGACTC GGCCGCCATT
CTCTCCCGCG CCAACCAGGC ACTCGCCACG CTCGAACGGT ACAAGCTACG CCTGGACGAG
GTCTCCGGCA CCCTCTCGGC CCTGGAGATA GAGGACCTGG TCACCGTTCG GGATGCGGTC
GCCGTCGTAC AACGGCTCGA GATGGTCCGT CGGATCGCCG ACGAGATCGC CGGCTACGTG
GTGGAGCTGG GCACCGACGG CCGGCTCCTC GCTCTGCAAC TCGACGAGCT GATGGCCGGT
GTGGACGCTG ACCGCACCCT TGTCATCCGG GACTACCTGC CCACCGGCCG CAAGTCACGC
ACCCTCGACG AGGCCCTGGT CGAGTTGGAC CTGCTGACCG CAACCGAGCT GATCGACCTG
GTCGCGGTCA GCAGAGCCAT CGGCTACCCG GCGGCTTCCG ACGCGCTTGA CGCCGCGCTC
AGCCCCCGCG GTTTCCGGCT ACTGGCCAAG GTGCCGCGCC TACCGGTGGC GATCGTTGAC
CGCCTGGTGG GGCACTTCGG CAGCCTTCAG CGGCTGCTCG GCGCGACCGT GGAGGACCTA
CAGGCCGTAG AGGGCGTCGG CGACGCCCGC GCCAGGGGCG TCCGAGAAGG ACTCTCCCGG
CTCGCCGAGG CATCGATCCT GGAACGCTAC GTCTGA
|
|---|
| Protein sequence | MPIDRDTTKP AGATPHARTG AVGSPARPIS VHVTGGAASD PLRANLALMA PGTALRDGLE
RILRGRTGAL IVLGYDKVVE SLCTGGFPLD VEFSATRVRE LCKMDGAVVL SSDGSRIVRA
AVHLMPDPAI PTEESGTRHR TAERVARQTG YPVISVSQSM RIISLYVNGQ RHVLDDSAAI
LSRANQALAT LERYKLRLDE VSGTLSALEI EDLVTVRDAV AVVQRLEMVR RIADEIAGYV
VELGTDGRLL ALQLDELMAG VDADRTLVIR DYLPTGRKSR TLDEALVELD LLTATELIDL
VAVSRAIGYP AASDALDAAL SPRGFRLLAK VPRLPVAIVD RLVGHFGSLQ RLLGATVEDL
QAVEGVGDAR ARGVREGLSR LAEASILERY V
|
|---|
| |