Gene Strop_4257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4257 
Symbol 
ID5060742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4825536 
End bp4826399 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content71% 
IMG OID640476519 
Producthypothetical protein 
Protein accessionYP_001161063 
Protein GI145596766 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0517934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAACGA AGCTGCCCCG ACTCCTCGCC GGCCTCGTCG ACGACGCCGC CGTCTTCCCA 
CCCGGCAGTG CGTCGCTGCC CGACGCCGTT ACGGCGCACC GACAGCACCG CTCGTCCTGG
TATGCCGAAC TCGTCGGCCC GCTCCTGGTC CCCGCCTCCA CAGTGCTTAA CCGCGAGCTG
CATGCCCTGG TCGAGCCGCT CGAGGAACTC GTCGTCGGGC TGATCGGAGA CACCGGACTA
GGCGGCCTCT CGGCCACCCT CGCCGCGGTG CCCCCCGGCG TCACGATCCA GCAGGTCGAG
GTCGCCGTCG CCGCCCGCGG TGCGGACCCG CAGCCCGGCC TGACCACGTT GTTCCCGCTG
GTGGAGCGGC TCGGCGGCCG TACCGTCTAT GCCGAGATTC CGCTGACCTT CGGCCTGATG
GGGGCGCTCG ACCGGCTCGT CGAGGCCCGC GCCGCCGGGC TGCCGGTGGC CGCGAAGTTC
CGGACCGGTG GGCTTGCCGC CGAGCTCTTC CCCACGCCCA CCGAGCTGGC CACGGTGATC
CACGGGTGTC AGCAGCGGGA GCTGCCGTTC AAGCTGACCG CCGGGCTGCA CCAGGCGATG
CGACACCTGG ACTCGGAGAC CGGGTTCACC CACCACGGCT TCGCCAACGT GCTCGCCGCC
GCGCTCGTCG CGTCCGGGGG TGCCGGCGTG GAGCAGATCA CCGAGCTGCT CACCGCTACC
GACCCTCGGC CGTTGCTCGC GCCGATCGAG CAGCGACTGG AGGCGGCGCG TCCGCTCTGG
GTCGGCTACG GCTCGTGCAG CATCCTGGAA CCACTGACCG ATCTGATCCA GCTGGGGCTG
GTGAATGGGG GTATTGACGC ATGA
 
Protein sequence
MSTKLPRLLA GLVDDAAVFP PGSASLPDAV TAHRQHRSSW YAELVGPLLV PASTVLNREL 
HALVEPLEEL VVGLIGDTGL GGLSATLAAV PPGVTIQQVE VAVAARGADP QPGLTTLFPL
VERLGGRTVY AEIPLTFGLM GALDRLVEAR AAGLPVAAKF RTGGLAAELF PTPTELATVI
HGCQQRELPF KLTAGLHQAM RHLDSETGFT HHGFANVLAA ALVASGGAGV EQITELLTAT
DPRPLLAPIE QRLEAARPLW VGYGSCSILE PLTDLIQLGL VNGGIDA