| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4245 |
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| Symbol | |
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| ID | 5060730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4812332 |
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| End bp | 4814038 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640476507 |
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| Product | tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit |
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| Protein accession | YP_001161051 |
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| Protein GI | 145596754 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.201953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0592114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGACCGG ACGGCTCTTC TGCCCTAGGC TTTCCGCTCA TGAGCAGTGC CGCCTCCTTC
TCGTACGCAC CTCTGCTGCC GACCGGTTCG GACCAGACGG AGTACCGCCT GATCACTGAC
GAGGGCGTTG ACGTCGTCAA CGGCCCCGGT GGTCGCCGAT TCCTGACTGT GGAGCCGGCG
GCGCTCACCG CGTTGACCGC CGAGGCGATG CACGACATCG CGCACTTTCT GCGCCCCGCA
CACCTGGCGC AGCTCCGGTC GATCATCGAC GACCCGGCGG CCTCGCCGAA CGATCGCTTC
GTCGCGCTGG ACCTGCTGCG CAACGCCAAC ATCGCCGCCG GTGGGGTGCT TCCGATGTGC
CAGGACACCG GCACCGCGAT CGTGCTGGGC AAGCGTGGCC GGCACGTGCT CACCGACGGG
GCGGACGCCG AGTCGATCTC CCGGGGCGTC TGGCAGGCGT ACACCCGGCT GAACCTGCGC
TACTCGCAGC TCGCCCCACT GACCATGTGG GAGGAGCGCA ACACCGGCAG CAACCTGCCG
GCGCAGGTGG AGCTCTACGC AGAGGACCCC GACGGGCAGC CGGACGCGTA CAAGTTTCTC
TTCATGGCCA AGGGTGGCGG CTCGGCCAAC AAGTCGTACC TGTACCAGGA GACCAAGGCG
CTGCTGAATC CGACGCGGAT GATGCAGTTC CTGGAGGAGA AGCTGCGGTT GATCGGCACG
GCGGCCTGCC CGCCGTACCA TCTGGCCGTG GTCATCGGCG GCACCAGCGC CGAGTACGCG
CTGAAGACCG CCAAGCTCGC CTCCGCGAAA TACCTCGACG CGCTGCCGAC CGCCGGTTCG
ATGACCGCGC ACGGCTTCCG TGACCTGGAG CTGGAGGCCG AGGTGTTGGA GCTGACCCGC
GGCTTCGGCA TCGGCGCGCA GTTCGGTGGC CGGTACTTCT GCCACGACGT GCGGGTGGTC
CGGCTGCCCC GGCACGGCGC GTCCTGCCCG GTGGCGATCG CGGTGTCCTG CTCGGCGGAC
CGGCAGGCGG TCGCGAAGAT CACCCCCTCG GGAGTGTGGC TGGAGCGGCT GGAGACCGAC
CCGGCCCGCT ACCTGCCCGA CGTGACGGAG TCCCAGCTGG AGTCGTCGGA GGCGGTCCGG
GTTGACCTCA ACCGGCCGAT GGACGAGATC CGCGCCGAGT TGAGCAGGTA CCCGGTGAAG
ACCCGGCTGT CGCTGAGCGG TCCGCTGGTC GTCGCCCGGG ACATCGCCCA CGCCAAGATC
GCCGAACGGC TGGACGCCGG TGAGCCGATG CCGGCGTACC TGCGGGACCA CGCGGTCTAC
TACGCCGGCC CGGCGAAGAC CCCCGAGGGC TATGCCTCCG GCTCGTTCGG CCCGACCACG
GCGGGTCGGA TGGACGCGTA CGTGGAGAAG TTCCAGGCCG CCGGCGGCTC GATGGTGATG
CTGGCCAAGG GCAACCGCTC CGCCCAGGTC ACTCGCTCCT GCCAGGAGCA CGGCGGCTTC
TACCTCGGCT CGATTGGTGG CCCGGCGGCC CGGCTCGCCC AGGACTGCAT CAAGCACGTC
GAGGTGCTCG AGTACGCCGA GCTCGGGATG GAGGCGGTCT GGCGGATCGA GGTGGAGGAC
TTCCCGGCCT TCATCGTGGT TGACGACAAG GGCAACGACT TCTTCGCCGA GGTGACCAAG
CCGGTCCTCA CCGTGGGCCG CCGCTGA
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| Protein sequence | MGPDGSSALG FPLMSSAASF SYAPLLPTGS DQTEYRLITD EGVDVVNGPG GRRFLTVEPA
ALTALTAEAM HDIAHFLRPA HLAQLRSIID DPAASPNDRF VALDLLRNAN IAAGGVLPMC
QDTGTAIVLG KRGRHVLTDG ADAESISRGV WQAYTRLNLR YSQLAPLTMW EERNTGSNLP
AQVELYAEDP DGQPDAYKFL FMAKGGGSAN KSYLYQETKA LLNPTRMMQF LEEKLRLIGT
AACPPYHLAV VIGGTSAEYA LKTAKLASAK YLDALPTAGS MTAHGFRDLE LEAEVLELTR
GFGIGAQFGG RYFCHDVRVV RLPRHGASCP VAIAVSCSAD RQAVAKITPS GVWLERLETD
PARYLPDVTE SQLESSEAVR VDLNRPMDEI RAELSRYPVK TRLSLSGPLV VARDIAHAKI
AERLDAGEPM PAYLRDHAVY YAGPAKTPEG YASGSFGPTT AGRMDAYVEK FQAAGGSMVM
LAKGNRSAQV TRSCQEHGGF YLGSIGGPAA RLAQDCIKHV EVLEYAELGM EAVWRIEVED
FPAFIVVDDK GNDFFAEVTK PVLTVGRR
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