Gene Strop_4230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4230 
Symbol 
ID5060715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand+ 
Start bp4796446 
End bp4797069 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content75% 
IMG OID640476492 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_001161036 
Protein GI145596739 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.702777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACG CACGTCTGCG GCCGGTCCTG GCCAAAACCC TGGACCGGGT CGCCGCCGCC 
GTGGACCGGC CGTGGGTGAC CCCCGGCCGG TTGACCGCCG CCGGCCTGAC CCTGGGGCTG 
GCCGCGAGCG CCGCCGCGGC GGCCGGCTGG TGGTGGCCGG CGCTGGTGGC GTGGCTGGTG 
TCCCGGCTCG CCGACGGCCT CGACGGGCCC CTCGCCCGCC GCCGCGGCAC CGCCTCCCCG 
TTGGGCGGAT TCCTCGACAT CGTCGCGGAC TTCACCGTGT ACGGGGCGTT CGTCGCCGGG 
GTCGCCGTCG GCGTTGACGG GCCCGCCACC CCGTTCCTGG TCCTGCTGGT GACCTACTAC 
GTCAACGGGG CGACGCTGCT GGCGTACTCG TCGATCGCCG AGCGAGTGGG CCGGGAGCGA 
GGCGACGAGC GGTCGCTGCA CTTCCTCGGT GGACTGGCCG AGGGCGCCGA GACCATCGCC 
GTACACGCCC TGTTCTGCCT GCTGCCCGGC TTCGCCGGGC ACCTCGCCTG GGGGTGGGCC 
GTCGTGGTGG CCATCACCGC CGGGCAACGC GTCGCGCACG CCGTCCGTAC CCTGTCCGAG 
CCCGCCGGGA GGCCCACCCG ATGA
 
Protein sequence
MIDARLRPVL AKTLDRVAAA VDRPWVTPGR LTAAGLTLGL AASAAAAAGW WWPALVAWLV 
SRLADGLDGP LARRRGTASP LGGFLDIVAD FTVYGAFVAG VAVGVDGPAT PFLVLLVTYY 
VNGATLLAYS SIAERVGRER GDERSLHFLG GLAEGAETIA VHALFCLLPG FAGHLAWGWA 
VVVAITAGQR VAHAVRTLSE PAGRPTR