| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4224 |
|---|
| Symbol | |
|---|
| ID | 5060709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4790045 |
|---|
| End bp | 4791760 |
|---|
| Gene Length | 1716 bp |
|---|
| Protein Length | 571 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640476486 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_001161030 |
|---|
| Protein GI | 145596733 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.576442 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTAGAC GCTTCACCGC TGGCGCGGTC GCTACCGTGA CGGGCCTGGC GCTGACGGTC
ACGGGGCTGA GTGTCCCCGC CGGCGCCGCA CCGAGTAGCA GCGAAACCTT CACTGTGGTC
GCGGAGGACG GCGTCAGCGC CGAGGCGGCC CTGGCGGAGA TCCAGGCAGC TGGGGGCGCC
GTCGTAAACC GGATCGACGA TGTCGGCGTG TTCCAGGTGA CCAGCGACCA GGTGGACTTC
AGCGATCGGA TTGCCGAGGC CGACAACCTG ATCGGTGCCG TCGAGCAGAA GGCCATTGGC
CGCAAGCCCA AGCTGGACCC GGTGGAGCAG GAGGCGTTGC TGACCGCCAT CAGCGGTAAG
AGCTCCGGCA AGGACAAGGA CAAGGGCAAG GGCTCCGGCG GCAAGGGCAA GGGGATGGAC
CCGCTGGACG ACAAGCTGTG GGGCCTGGAC ATGATCCGTG CCGACAAGGC CCGCAAGAAG
GAGCCCGGCG ACCGGCGCGT CACCGTCGGC GTGCTGGACA CCGGCGTCGA CGCCAGCCAC
CCCGACATCG CACCGAACTT CAACTGGGCG TTGTCCCGCA ACTTCGCGCC GGACATGCCC
GAGGTCGACG GTGAGTGCGA GGTAGCGAGC TGCCTCGACC CGGTCGGCAC CGATGACGGT
GGCCACGGCA CCCACGTGGC CGGCACCATC GGGGCCGCCG CCAACGGTTT CGGCCTCTCC
GGGGTCGCGC CGAACGTCTC ACTGGTGGAG CTGAAGGGCG GCCAGGACTC CGGTTACTTC
TTCCTGGAGC CGGTGGTCCA GTCGTTGCTG CACGCGGGCC GGGCCGGCCT CGACGTGGTG
AACATGTCCT TCTACGTCGA CCCGTGGCTC TACAACTGCA CCGCCAACCC GGCCGACTCG
CCCGAACACC AGGCTGAGCA GCGGGCCATC ATCAAGGCGA TGAAGCGGGC GCTGAACTTC
GCCCACAACC GGGGCGTCAC CCTGGTCGGC TCCCTCGGCA ACAACCACGA GGACCTGGGC
GCCCCCAGGA TCGACACGTC CAGCCCGGAC TTCGGTGACA CTCCGCCGTA CCCGCGTGAG
ATCGACAACG ACAGCTGCTG GGACCTGCCG GTGGAAGGGC CGCACGTGAT CGGCGTCTCC
GCCGTTGGCC CCTCGGGCAA GAAGGCCGCC TACTCCAACT ACGGCACCGA GCAGATCGGC
ATCGCCGCGC CCGGCGGCTG GTTCCGCGAC GGTTTCGGCA CCGACACCTT CAGCACCTTC
CCCAACCTGA TCCTCTCCAC CTACCCGGAG AAGGTGCTCA AGGAAGACGG ACTGGTGGAC
GCGGACGGCA ATATCGATCC GAGCGCCGAA GGGCTCGTCT TCAAGGAGTG CAAGAGCAAC
GGTGAGTGCG GCTACTACCG CTACCTCCAG GGCACCTCGA TGGCGTCGCC GCACGCCTCG
GGCGTGGCCG CGCTGATCGT CAGCAAGCAC GGGAAGAAGC AGGGCCGCAA CGGCTACGGT
CTGGCCCCGG ACCTGGTCGA GCAGCACCTC TACCGCACCG CCACCGAGCA GGCCTGCCCG
AACCCGCGTC TACAGCAGTA CCGCGACGAG GGCCGCGACG AGACCTACGA CGCGTACTGC
GACGGTGGGC GCAACTTCAA CGGCTTCTAC GGGTACGGCG TCATCGACGC GTACACGGCG
GTAGCCACCC CGCTCAAGTC GCACGGCCGA CGGTAG
|
|---|
| Protein sequence | MSRRFTAGAV ATVTGLALTV TGLSVPAGAA PSSSETFTVV AEDGVSAEAA LAEIQAAGGA
VVNRIDDVGV FQVTSDQVDF SDRIAEADNL IGAVEQKAIG RKPKLDPVEQ EALLTAISGK
SSGKDKDKGK GSGGKGKGMD PLDDKLWGLD MIRADKARKK EPGDRRVTVG VLDTGVDASH
PDIAPNFNWA LSRNFAPDMP EVDGECEVAS CLDPVGTDDG GHGTHVAGTI GAAANGFGLS
GVAPNVSLVE LKGGQDSGYF FLEPVVQSLL HAGRAGLDVV NMSFYVDPWL YNCTANPADS
PEHQAEQRAI IKAMKRALNF AHNRGVTLVG SLGNNHEDLG APRIDTSSPD FGDTPPYPRE
IDNDSCWDLP VEGPHVIGVS AVGPSGKKAA YSNYGTEQIG IAAPGGWFRD GFGTDTFSTF
PNLILSTYPE KVLKEDGLVD ADGNIDPSAE GLVFKECKSN GECGYYRYLQ GTSMASPHAS
GVAALIVSKH GKKQGRNGYG LAPDLVEQHL YRTATEQACP NPRLQQYRDE GRDETYDAYC
DGGRNFNGFY GYGVIDAYTA VATPLKSHGR R
|
|---|
| |