Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4223 |
Symbol | |
ID | 5060708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4789319 |
End bp | 4789990 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 640476485 |
Product | regulatory protein, IclR |
Protein accession | YP_001161029 |
Protein GI | 145596732 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.918168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATACCA CCCCCGGACA CAGCGACCCG TCGGCCCCGC GTGGCGGCGA GAGCGCGCAG ACGCTGGACC GGGGGTTGCG CCTGCTACAC CTGGTCGCCG ACGCACCGGG CGGGTTGACC GTCACCGAGC TGGCGGACCG GCTGCGCATT GGGCGCGCCG CCGTGTACCG GCTGGTCGCG CCATTGAGCG CGCATGGCCT GCTGCGCCGG GACGCCGACA GCCGGCTCCG CCTCGGAGTA GGGGTGCTGA ATCTGGCCCG ACGGGCCCAG CCGCTGCTCG CCGAGGGGGC GCTGCCGGCG CTGCGCCAAC TCGCCGAGCA GACCGGCGCG ACCGCGCACC TGACCGTGGT CGAGGGCGGT GAGGGCGTCG CGCTGGCGGT GGTGGAGCCG AGCTGGACGG CCCTGCACGT GGCGTACCGG ACCGGGGCGC GGCATCCGCT GGAGCGCGGG GCGGCAGGGC GGGCGATTCT CGCCGGCCGG GCCGGCGCGG CCGGACCCGT GGACACGGCC GGGGAGTTGC AGTCCGGGGC GCACGGAGTG GCCGCGCCCG TGCTGGGTGT GCCGGGTTTG GAGGCGAGCG TGGGTGTGGT CTCCCTGACG CCGTTGGACA CCGAGACGGT CGGCGTCCAG GTCCGCACGG CCGCCGTCGC CGTCGCCGAC GCGCTGCGCT GA
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Protein sequence | MDTTPGHSDP SAPRGGESAQ TLDRGLRLLH LVADAPGGLT VTELADRLRI GRAAVYRLVA PLSAHGLLRR DADSRLRLGV GVLNLARRAQ PLLAEGALPA LRQLAEQTGA TAHLTVVEGG EGVALAVVEP SWTALHVAYR TGARHPLERG AAGRAILAGR AGAAGPVDTA GELQSGAHGV AAPVLGVPGL EASVGVVSLT PLDTETVGVQ VRTAAVAVAD ALR
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