Gene Strop_4223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4223 
Symbol 
ID5060708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4789319 
End bp4789990 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content77% 
IMG OID640476485 
Productregulatory protein, IclR 
Protein accessionYP_001161029 
Protein GI145596732 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.918168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATACCA CCCCCGGACA CAGCGACCCG TCGGCCCCGC GTGGCGGCGA GAGCGCGCAG 
ACGCTGGACC GGGGGTTGCG CCTGCTACAC CTGGTCGCCG ACGCACCGGG CGGGTTGACC
GTCACCGAGC TGGCGGACCG GCTGCGCATT GGGCGCGCCG CCGTGTACCG GCTGGTCGCG
CCATTGAGCG CGCATGGCCT GCTGCGCCGG GACGCCGACA GCCGGCTCCG CCTCGGAGTA
GGGGTGCTGA ATCTGGCCCG ACGGGCCCAG CCGCTGCTCG CCGAGGGGGC GCTGCCGGCG
CTGCGCCAAC TCGCCGAGCA GACCGGCGCG ACCGCGCACC TGACCGTGGT CGAGGGCGGT
GAGGGCGTCG CGCTGGCGGT GGTGGAGCCG AGCTGGACGG CCCTGCACGT GGCGTACCGG
ACCGGGGCGC GGCATCCGCT GGAGCGCGGG GCGGCAGGGC GGGCGATTCT CGCCGGCCGG
GCCGGCGCGG CCGGACCCGT GGACACGGCC GGGGAGTTGC AGTCCGGGGC GCACGGAGTG
GCCGCGCCCG TGCTGGGTGT GCCGGGTTTG GAGGCGAGCG TGGGTGTGGT CTCCCTGACG
CCGTTGGACA CCGAGACGGT CGGCGTCCAG GTCCGCACGG CCGCCGTCGC CGTCGCCGAC
GCGCTGCGCT GA
 
Protein sequence
MDTTPGHSDP SAPRGGESAQ TLDRGLRLLH LVADAPGGLT VTELADRLRI GRAAVYRLVA 
PLSAHGLLRR DADSRLRLGV GVLNLARRAQ PLLAEGALPA LRQLAEQTGA TAHLTVVEGG
EGVALAVVEP SWTALHVAYR TGARHPLERG AAGRAILAGR AGAAGPVDTA GELQSGAHGV
AAPVLGVPGL EASVGVVSLT PLDTETVGVQ VRTAAVAVAD ALR