Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4220 |
Symbol | |
ID | 5060705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4785558 |
End bp | 4786649 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640476482 |
Product | ABC transporter related |
Protein accession | YP_001161026 |
Protein GI | 145596729 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.886813 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCACGG TTACCTACGC CAAGGCGTCC CGGATCTACC CGGGCACCGA GCGGCCCGCC GTCAACCAGC TCGACCTGGA GATCGGCGAC GGCGAGTTCC TGGTCCTGGT CGGCCCCTCC GGTTGCGGTA AGTCCACCAG CCTGCGCATG CTCGCCGGGC TCGAGGACGT TGACCAGGGT TCGATCTCCA TCGACGACCG GGACGTCACC CACCTGCCGC CGAAGGCCCG CGACATCGCG ATGGTCTTCC AGAACTACGC CCTCTACCCG CACATGTCGG TGTACGAGAA CATGGCGTTC GCCCTCAAGC TACGCAAGAC GCCGAAGGCG GAGATCGACC GGCGGGTCAA GGAGGCGGCG ACGCTGCTCC AACTGGAGGA GTACCTCGGC CGCAAGCCGA AGGCGCTCTC TGGCGGCCAG CGCCAGCGGG TGGCAATGGG GCGGGCGATC GTCCGCGAGC CGCAGGTCTT CCTGATGGAC GAGCCCCTGT CGAACCTCGA CGCCAAGCTG CGGGTGCAGA CCCGTACGCA GATCGCGTCC CTGCAGTCCA AGCTCGGTGT GACCACCGTC TACGTCACCC ACGACCAGGT CGAGGCCATG ACGATGGGGC ACCGGGTGGC AGTCCTGCTC GACGGCGAAC TCCAGCAGGT CGACACGCCG CGGGCGCTCT ACGACACCCC GGCCAACGTC TTCGTCGCCG GCTTCATGGG CTCGCCGGCG ATGAACATCA AGACCGTGCC GTTGACCGAC AAGGGCGCCG AGTTCGCCGA GATGCACATC CCGCTCACCC GCGAGCAGGT CGAGGCGGCC CGCGCCGAGG GAGCCGGCGA CAAGATCGTG GTGGGCTTCC GTCCGGAGGA CTGTGAGCTG GTCAGCCCGA CCGAGGGGGG CCTACCGGTC ACCGTTGAGC TGGTCGAGGA CCTCGGGTCG GACGCCAACA TCTACGGCCA CGCCGCGCTG GAAGGCACCA ACGAGCGGTT CGTGGTCCGC ACCGACCGGC GCACCATGCC GAACATGGGC GGCACCGTGT TCGTCCGGCC GCAGCCTGGA CGCAGCCACA TCTTCAACTC GAAGACCGGC CTCCGGATCT GA
|
Protein sequence | MATVTYAKAS RIYPGTERPA VNQLDLEIGD GEFLVLVGPS GCGKSTSLRM LAGLEDVDQG SISIDDRDVT HLPPKARDIA MVFQNYALYP HMSVYENMAF ALKLRKTPKA EIDRRVKEAA TLLQLEEYLG RKPKALSGGQ RQRVAMGRAI VREPQVFLMD EPLSNLDAKL RVQTRTQIAS LQSKLGVTTV YVTHDQVEAM TMGHRVAVLL DGELQQVDTP RALYDTPANV FVAGFMGSPA MNIKTVPLTD KGAEFAEMHI PLTREQVEAA RAEGAGDKIV VGFRPEDCEL VSPTEGGLPV TVELVEDLGS DANIYGHAAL EGTNERFVVR TDRRTMPNMG GTVFVRPQPG RSHIFNSKTG LRI
|
| |