Gene Strop_4212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4212 
Symbol 
ID5060696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4777701 
End bp4778357 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content65% 
IMG OID640476473 
ProductMOSC domain-containing protein 
Protein accessionYP_001161018 
Protein GI145596721 
COG category[S] Function unknown 
COG ID[COG2258] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGCA TCCTCTCGGT CAACCTGGCG GTCCCGGAAC ACAGCACCGC GAAGCGAGTC 
GGGGTCACCG GCATCAACAA GCAGCCAGTG GACAGGCCTG TGCCGGTCCG TGCTCCCGGA
CCGAAAACCA CCGGTCTCCA CAGTGGCCTG GTAGGCGACC AGATCTTCGA CATCGAGAAC
CACGGCGGTG ACGACCAGGC CGTGTACGCG TACGCCCGCG AGGACTACGA CTGGTGGGAA
GCCCGACTTG ACCGCGTGCT TCCGGGCGGG ATCTTCGGCG AGAACCTGAC CACGGTTGGC
GTTGATGTCA ACGGCGCGGT CATCGGCGAG ACCTGGCGCA TCGGCGACAG TCTGGAACTT
CAGCCGACGT TTGGTCGTGT TCCGTGCGCC ACTTTCCAGG CCAAGATGGC CGAGCCGCAG
TGGGTGAAGA CGTTCACCCG GGAAAACCGG CCTGGCACCT ATCTGCGCGT CGTCAAGCCG
GGAGAGGTGC AAGCCGGAGA TTCCGTTTCT GTCGTCGACC GGCCGGCCCA CGGCATAACA
ATCGCGGCGG TCTTCCACGC CTACCTGAAC GAGCCGGAGC TACTGCCCGC CCTGACCGAG
GTCGAGGACC TACCCGACAG CTTACGACAG CTACTGCGTC GTCGTTCGCG CAGCTGA
 
Protein sequence
MGSILSVNLA VPEHSTAKRV GVTGINKQPV DRPVPVRAPG PKTTGLHSGL VGDQIFDIEN 
HGGDDQAVYA YAREDYDWWE ARLDRVLPGG IFGENLTTVG VDVNGAVIGE TWRIGDSLEL
QPTFGRVPCA TFQAKMAEPQ WVKTFTRENR PGTYLRVVKP GEVQAGDSVS VVDRPAHGIT
IAAVFHAYLN EPELLPALTE VEDLPDSLRQ LLRRRSRS