| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4204 |
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| Symbol | |
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| ID | 5060688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4771231 |
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| End bp | 4771884 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640476465 |
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| Product | sigma-70 region 2 domain-containing protein |
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| Protein accession | YP_001161010 |
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| Protein GI | 145596713 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.52678 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGGTTA CAGTCAGGCA TGCCCCACAG AAGGCGAGCC GTCCGTTGAC GGCGGCGGAC
GTCCAGGAGC CCCCGGGCCC ACCGGAGGAC GATCTGGCTG CCCGCTTCCG CTCCGGCGAT
GAGGCGGCGC TGCGAGAGGC GTACGACCGG TTTGGTCGAG CGGTGCTGCA CCTGGCCGTG
AGCACGCTGT CGAACCGCAG CGATGCCGAG GATGTGACGC AGGCGACGTT CGTAGCCGCA
TGGCTGGGGC GGGACACCTT CGACCCGACG AAGGGGTCGC TGATCGGCTG GCTGCTCGGC
ATCGGTCGGC GAAAGGTGAT CGATCGAATG CGGGCTACCG CCCGGGAGCA CCGGGTGGTC
GAGACGGTTC GTCAGCTTCC TGACCCCACC CCGAGTCGCT CGGACCCAGA CACTGTGGTC
GATCGACTGG TGGTGGCCGA CGAGCTGGCG CGTCTCCCCG GCGAGCAACG ACGCATGCTG
GAGTTGGCGT TCTTCGACGA CCTGACCCAC CATCAGATAG CGACCATGAC CGGCGTGCCA
CTCGGCACGG TGAAGAGTCA CATCCGGCGC GGCATGCAGT GCCTGAAACG CAGATGGGAG
GTGGACGGTG CAACACATGG ACCACGACCG GCTGGTCTTT CTGGCGCTCG GTGA
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| Protein sequence | MGVTVRHAPQ KASRPLTAAD VQEPPGPPED DLAARFRSGD EAALREAYDR FGRAVLHLAV
STLSNRSDAE DVTQATFVAA WLGRDTFDPT KGSLIGWLLG IGRRKVIDRM RATAREHRVV
ETVRQLPDPT PSRSDPDTVV DRLVVADELA RLPGEQRRML ELAFFDDLTH HQIATMTGVP
LGTVKSHIRR GMQCLKRRWE VDGATHGPRP AGLSGAR
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