Gene Strop_4196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4196 
Symbol 
ID5060680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4763948 
End bp4764829 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content66% 
IMG OID640476457 
Producthypothetical protein 
Protein accessionYP_001161002 
Protein GI145596705 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.357043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAGACG TCACCCGCCG CGAGTCGAGA AGAGCTTTCC CCGTGACAAA GGCCCCTTCG 
GAATCCACGC AATCAGCCGC CAAACCGAAC GGGTCACTCT CCTCGAAGAT TGACACTACG
ATCGCCCACC CCGCCCGAAT CTGGAACTAC TGGCTGGGCG GTAAGGACAA TTTCGCGGTG
GACCGCGAGG TCGGCGACCA CACCATCGCC GCCTACCCAC ACATCATCGA ACTGGCCCGT
AGCCAGCGAG CCTTCCTGGC ACGCGCGGTC ACCCATCTGG CAAAGGAAAC CGGCGTTCGC
CAGTTCCTGG ATATCGGCAC CGGCCTGCCG ACTGCCAACA ACACCCACGA GGTGGCTCAG
TCGATCGCCC CCGAGTCGCG CATCGTCTAC GCCGACAACG ATCCGCTGGT TCTGGTGCAC
GCGCGGGCGC TGTTGACCAG CCACCCCAAG GGTGCGACCG ACTACATCGA CGCCGACCTT
CGGCAACCGG ACAAGATCCT GGCCGCGGCG GCCGAGACCC TCGACTTCAG CAAGCCGATC
GCCGTCACCA TGCTCGGCAT TGTGATCTTC CTGGCCGACG ACGACGAGGC ATACGGAGTT
GTCGACCACC TGGTTGCGGC TCTCCCGTCG GGGAGTTACC TGGCCATGAC ACACACCACC
AACGCCATCC ACGGCGCCGC GACCGACGAG GCGGTCCGGA TCTGGAACGA GGGCGGCTCG
GACCCGATGG TGGTGCGTAG TCTCGATGGC ATCGGCCGAT TCTTCCGCGG CCTCGAGCTG
GTCGAGCCGG GCATCGTCTC GCTGACCCGG TGGCGACCCG ACGCCGAGAC CGCCGCCGGG
CCCGAGGTCG ACGAGTTCTG CGGGGTGGGC TACAAGCCGT GA
 
Protein sequence
MRDVTRRESR RAFPVTKAPS ESTQSAAKPN GSLSSKIDTT IAHPARIWNY WLGGKDNFAV 
DREVGDHTIA AYPHIIELAR SQRAFLARAV THLAKETGVR QFLDIGTGLP TANNTHEVAQ
SIAPESRIVY ADNDPLVLVH ARALLTSHPK GATDYIDADL RQPDKILAAA AETLDFSKPI
AVTMLGIVIF LADDDEAYGV VDHLVAALPS GSYLAMTHTT NAIHGAATDE AVRIWNEGGS
DPMVVRSLDG IGRFFRGLEL VEPGIVSLTR WRPDAETAAG PEVDEFCGVG YKP