| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4187 |
|---|
| Symbol | |
|---|
| ID | 5060671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4754571 |
|---|
| End bp | 4755155 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640476448 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001160993 |
|---|
| Protein GI | 145596696 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.499034 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGA TTCTGCGTCG TAGCGTCCTG GGTATCGCTG GTCTGGCCCT GTCCACCGGT
GTCGTCGCCG GTCCCCTGGC CACCTACACC GACAGCACCC CGGCCTCGGC TTCGGCCGCG
GCGGTGCAGG TCGCGAAGCC GGACCTGGAC ACCCTGATCC CGCACGGCAC CCAGGGCGAG
CAGTCACGGA TCACTCTCGG TGATGAGCAG ACCGGGAACG TGAAGGCCAT CATCGAGGCC
ACGAAGGCCG CCGGGATGGA CGAGCGGGCC GCCGTCGTGG CGATCGCGAC CAGCTTGCAG
GAGTCGAAGC TGGAGAACCT GGGTCACCTG GGTGACCGCA ACGACCACGA CTCGCAGGGC
CTGTTCCAGC AGCGCCCGTC CTCCGGCTGG GGCACGGTCG AGCAGATCAC CGACCCCGCC
TACTCCACCA CCGCGTTCCT CAACGGGCTC AAGCAGGTTG AGGGTTGGCA GGAGATGCCG
TTGACCGAGG CCGCGCAGAC GGTACAGGTG TCGGCGTACC CGTTCCACTA CGCCCAGTGG
GAGACCCAGG CCGCCGACCT CGTGGCCGAA CACTGGACCA GCTGA
|
|---|
| Protein sequence | MNTILRRSVL GIAGLALSTG VVAGPLATYT DSTPASASAA AVQVAKPDLD TLIPHGTQGE
QSRITLGDEQ TGNVKAIIEA TKAAGMDERA AVVAIATSLQ ESKLENLGHL GDRNDHDSQG
LFQQRPSSGW GTVEQITDPA YSTTAFLNGL KQVEGWQEMP LTEAAQTVQV SAYPFHYAQW
ETQAADLVAE HWTS
|
|---|
| |