| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4178 |
|---|
| Symbol | |
|---|
| ID | 5060662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 4745683 |
|---|
| End bp | 4746063 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640476440 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001160985 |
|---|
| Protein GI | 145596688 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.634845 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTT TCTCGTTCGA CGGACTGCAC CACGTTCAGC TCGCCATCCC GGCTGGTGCG
GAGGACCTGT GCCGTCAGTT CTGGGGCGAC GTGCTGGGCA TGACCGAGCT TGAGAAGCCG
CCTGTGCTGG CTGCCCGCGG TGGCTGCTGG TTCCGCGGCG GGGGCCTCGA GGTGCACCTG
GGCGTGGAGG AAGATTTCCG GCCGGCCCGC AAGGCACACC CCGGCATCCA GGTGACCTCG
CTGAACGGAC TGGCCCAGCG ACTGACTGAG GGCGGCCACG AGGTGATCTG GGACGACAAC
TTCCCCGGCC ACCGGCGCTT CTACGCCTTC GACAAGCTCG GCAACCGGCT GGAGTTCCTC
GAGCCGGCGC CAACGTCCTG A
|
|---|
| Protein sequence | MSTFSFDGLH HVQLAIPAGA EDLCRQFWGD VLGMTELEKP PVLAARGGCW FRGGGLEVHL
GVEEDFRPAR KAHPGIQVTS LNGLAQRLTE GGHEVIWDDN FPGHRRFYAF DKLGNRLEFL
EPAPTS
|
|---|
| |