Gene Strop_4131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4131 
Symbol 
ID5060615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4696958 
End bp4698163 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content71% 
IMG OID640476393 
Producthistidine kinase, dimerisation and phosphoacceptor region 
Protein accessionYP_001160938 
Protein GI145596641 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.771261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATGCGG CGCCGAACGT CCTCCTCACC AGGCCCGGAT CGTTGCAGCT GGTCACCCCG 
CTGATCTTCG TCTCGTGGCT GTTGACGGCA TACCCGTGGG CCTGGTTCCT GACTAGCCCG
CCCGAGGAAC GCTGGTCGTC GCTGTTCCCG CCGGGCGTCC TCGCCACCAC CGCGGCCCGG
GTAGCTCTGC TGGTGGCCGC CGCCGCGGCG CTGGCCGGCA GCATCCGGTT GCGCCGGTTA
CCCCTGCCCG CCTTCGGGCT GCTACTGGCC AGCATCGCGA TCCCCACCCT AGCGTGGCAG
CAGCCGGAGA TCTGGGCGTT GCAGATCCTC CCGATCGACT TCGCCCTGGT GGCCATCACG
CTGTACTCCG CACCCCGGGT GACGCTGACC GCGACCAGCC TGGCCCTGGG CCTGCTCGCC
GTCTGTCTGA TCACACGCTT GGTGGTGCAT GGGGAAGGCG GCACCCCGTC GGAACCGGGC
ATGGCGCTCA CCGTGGGCAT GGCCGTCCTC ATCGGAACGG TGATCCGGCA GCGACGGGCC
CAGGCCGCGG CCGCGCGCAG ACAGGCCTCC GCCGAGGTGG TCAGCGCCGA ACGGCTCCGG
ATCGCCCGCG ATCTTCACGA CATGGTGGCG CACAGCCTTG GCGTCATCGC GCTGCAGGCC
GGTGCGGCGG GCCGCGTCAT GCATACGCAA CCGGAAGCCG CCCGGGAAGC GATCCACAAC
ATCGAGAAGG TCGGCCAGGA GACCCTGTCC GGCCTACGCC GGGTCGTCTC CTCGCTGCGC
AACGTCGACC CCGACCGGCC GGACTCCCCC ACGGCGGCGC CCTCGCTCGC CACCCTCGAC
GAGCTCATCG CCACCACCCG GGCGGCCGGC GTGGACATCG ACGTGAGCCG GCAGGGCGAG
CCGCGGGCCC TGCCCATGGA GATCGACGCC GCCGCATATC GCATCGTTCA AGAGGCTGTG
GCCAACGTGA TCCGACATGC CGAGACCGAC GCCTGCCGGA TCCTGATCAG TTCCCGCGAA
GGCGAGTTGT TCGTGGAGGT GGTCGACGAC GGAGCCGGTC GCGGCCGGCG GCCTGGGGCC
GGGTTCGGAC TGGCCGGCAT GCGGGAGCGG GTCGAGATGC TGCACGGCAC GATCGTCACT
GGCCCACGTC CGGAGGGCGG CTTCCGGGTG GCGGCCCACC TACCCCTCCC GACGGACGAC
CGATGA
 
Protein sequence
MHAAPNVLLT RPGSLQLVTP LIFVSWLLTA YPWAWFLTSP PEERWSSLFP PGVLATTAAR 
VALLVAAAAA LAGSIRLRRL PLPAFGLLLA SIAIPTLAWQ QPEIWALQIL PIDFALVAIT
LYSAPRVTLT ATSLALGLLA VCLITRLVVH GEGGTPSEPG MALTVGMAVL IGTVIRQRRA
QAAAARRQAS AEVVSAERLR IARDLHDMVA HSLGVIALQA GAAGRVMHTQ PEAAREAIHN
IEKVGQETLS GLRRVVSSLR NVDPDRPDSP TAAPSLATLD ELIATTRAAG VDIDVSRQGE
PRALPMEIDA AAYRIVQEAV ANVIRHAETD ACRILISSRE GELFVEVVDD GAGRGRRPGA
GFGLAGMRER VEMLHGTIVT GPRPEGGFRV AAHLPLPTDD R