Gene Strop_4122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4122 
Symbol 
ID5060606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4688562 
End bp4689632 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content69% 
IMG OID640476385 
Producthypothetical protein 
Protein accessionYP_001160930 
Protein GI145596633 
COG category[L] Replication, recombination and repair 
COG ID[COG3335] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGGC TGCAACCTGT CGACCGGGTC CAGCTGACCC GGCGCCGCCG CAAGGCCCTG 
ACCCGAATCG CCGGGCAGTC CAGCGCACAG TTCCGGCAGG TCCGCCGGGC CCGGATCCTG
CTCGCCGCCG CGAACCGGGT CCCGAACGCG CAGATCGCCC GGCAGGTCGG CTGCACGGTG
GCCACCGTGC GTAAGACCCG CCGCGACTAC CGCACCCGGG GCATGCGCGC CCTTAACGAC
CGGCCCCGCC CGGGACGCCC GCCGCTCTAC GACATCGACG TACACCTGCT GATCATCGCG
ACCGCGACCA GTGAGCCACC CGACACCGAC GCCCAATGGA CCCACCCGCT GATCGCCGGG
CACCTGCGGC AGCGGCACGG CATCGCGATC TCCGCCAGCC AGGTCGGGCG GATCCTGGCC
GGTGTCGACA TCAAACCGCA CCGAGTCCGG GGCTGGCTCA ACCGGCCCGA CGATCCCGGC
TTCTTCGCCC GTGCCGAGCA GATCTGCACT CTCTACCAGC ATGTTCCCGC CGGCACGGTA
CTGCTCAGCG TGGACGAGAA GACCGGTATT CAGGCCAAGT CACGCCGATA CCGGACCCGC
CGCGCGGGGC ACCGCCGCCC GGAACGCCGC GAGTTCGAGT ACCGCCGACA CGGCACCGTC
TCACTGATGG CCGCCCTCGA CGTCTCCGAC GGCACCGTCC GGCCGAAGAT CATCGACCGC
AACAACTCCG ACGCCTTCCT CGACTTCCTC ACCGAGATCG ACCTCGAAAC CCCTGCCCAC
CTGCGGATTC ACCTGGTCCT GGACAACGGG TCCAGTCACA CCTCGAAAGC CACCCGGGCC
TGGCTGGCCG CACGCCCGAG GTTCAGCGTG ACCTACACCC CGAAACACGC GTCCTGGCTG
AACATAGTGG AACTGGTCTT CTCGATCCTG ACCCGCAGGC TACTGCGTCG CGGCGAGTTC
ACCTCCCGCG AGCACCTCGC CAACAAGATC CTCAAGTTCT TCACCCACTA CAACCGGACC
GCGAAACCCT TCCGCTGGAC CTACGACGGC CGCCCCCTCA AGGCCGCATG A
 
Protein sequence
MARLQPVDRV QLTRRRRKAL TRIAGQSSAQ FRQVRRARIL LAAANRVPNA QIARQVGCTV 
ATVRKTRRDY RTRGMRALND RPRPGRPPLY DIDVHLLIIA TATSEPPDTD AQWTHPLIAG
HLRQRHGIAI SASQVGRILA GVDIKPHRVR GWLNRPDDPG FFARAEQICT LYQHVPAGTV
LLSVDEKTGI QAKSRRYRTR RAGHRRPERR EFEYRRHGTV SLMAALDVSD GTVRPKIIDR
NNSDAFLDFL TEIDLETPAH LRIHLVLDNG SSHTSKATRA WLAARPRFSV TYTPKHASWL
NIVELVFSIL TRRLLRRGEF TSREHLANKI LKFFTHYNRT AKPFRWTYDG RPLKAA