| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4103 |
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| Symbol | |
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| ID | 5060585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4662437 |
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| End bp | 4665976 |
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| Gene Length | 3540 bp |
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| Protein Length | 1179 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640476364 |
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| Product | ATPase domain-containing protein |
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| Protein accession | YP_001160911 |
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| Protein GI | 145596614 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.972573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGG CGAAGCAGCC GGCAGCGGAG CTGTCCGCGC CGGACCCCGA TGCGGTCCTC
ATCGAGCTGA CCGAGGCGCT TCGGCGCGTT CGCCAGGGCG ATCTCAAGGT GCGGCTGCCG
CACCGGTCGG GCCGGGCGGG CGAGTTGGCG GACGCCTTCA ACGAGGTGGT GTCGCTCCAG
GAACGGCAGC ACCACGACCT GCGCCGGATC AGCCGGATCG TGGGCCGGGA CGGACGACTC
ACCGAACGCC TCGACGACGA GGACCTGGAT GGCTCCTGGG CGGAGGGGCA GCAGGCGGTC
AATTCGCTCA TCGACGACCT CGGGCGCCCG ACCATCGAGA TCGCTCGGGT GATCGCGGCG
GTCGCCGCGG GCGACCTCTC GCAGCACATG GCGCTGGAGC TGGATGACCG ACCGCTGCGT
GGGGAGTATC TGCGTATCGG GCGCACGGTG AACACCGTGG TCGACCAGTT GTCGTCGTAC
GCCGATGAGG TGACCCGGGT GGCTCGGGAG GTGGGTACCG AGGGGAAGCT GGGTGGTCAG
GCCGATGTCC GGGGTGCCGC GGGCACCTGG AAGGACCTGA TCGACTCGGT GAACACCATG
GGGTCGAACC TGACCGCACA GGTCCGCAAC ATCTCGCAGG TGTCGACGGC GGTCGCGACG
GGTGATCTGG GGCAGAAGAT CACGGTTGAT GCGCAGGGCG AGATCCTGGA GTTGAAGAAC
ACCGTCAACA CGATGGTGGA TCAGTTGTCG TCGTTCGCCG ACGAGGTGAC CCGGGTGGCT
CGGGAGGTCG GCATCGACGG GAAGCTGGGT GGTCAGGCTC AGGTGCGGGG CGTCTCCGGG
ACGTGGCGGG ACCTCACCGA GAACGTCAAC CAACTCGCCG GCAATCTGAC CAGCCAGGTC
CGCAACATCT CGCAGGTGTC GACGGCGGTC GCGCGGGGTG ATCTGGGGCA GAAGATCACG
GTTGATGCGC AGGGCGAGAT CCTGGAGTTG AAGAACACCG TCAACACGAT GGTGGATCAG
TTGTCGTCGT TCGCCGACGA GGTGACCCGG GTGGCTCGGG AGGTGGGTAC CGAGGGGAAG
CTGGGTGGTC AGGCTCAGGT GAAGGGTGTC TCCGGGACGT GGCGGGACCT GACGGACAAC
GTGAACTCGA TGGCGTCGAA CCTGACCTCG CAGGTGCGCA ACATCGCCTC GGTCACGACT
GCCGTCGCGC GGGGTGATCT GGGGCAGAAG ATCACGGTTG ATGCGCAGGG CGAGATCCTG
GAGTTGAAGA ACACCGTCAA CACGATGGTG GATCAGTTGT CGTCGTTCGC CGACGAGGTG
ACCCGGGTGG CTCGGGAGGT GGGTACCGAG GGGAAGCTGG GCGGTCAGGC TCAGGTGAAG
GGCGTCGCCG GGACGTGGCG GGACCTCACC GAGAACGTCA ACCAGCTCGC CTCCACCCTG
ACCATTCAGC TGCGCGCCAT CGCCGAGGTC TCCACGTCGG TGACCCGGGG CGATCTGACC
CAGCAGATCG CGGTCGAGGC GCAGGGGGAG GTCGCCGAGC TGACCGACAA CATCAACCAG
ATGATCGTCA CCCTCCGGGA GACGACCACG GTGAACGCCG AGCAGGGCTG GCTGGACTCC
AACCTGGCCC GCATCGGTGG GCTGCTGCAG GGGCAGCGGG ATCTCGGCGA GGTCTGCCGC
ATGATCATGA TGGAGGTGAC TCCGCTGGTG GACGCGCAGC TCGGCGCGTT CTTCCTGGTG
GATGACGCTG GGGGCAACTT CCGACTACGG CTCACCGCCT CGTATGGCTA CGTCGCTCGT
GGGCAGGACG TGACGTTCGG CCCCGGTGAG GGCCTGGTCG GCCAGGTCGC GCTGTCCCGG
CGCACGATTC GGGTCAGCGG ACCGGCGGAG AGCCGGCTCC GGCTCCGTTC CGGGCTCGCG
GACACCCCGC CGGCCGACCT GGTGGTGCTG CCGGTCATCT TCGAGGGCGA GCTGCTCGGT
GTGATCGAGT TCGCCAGCGT GACCGCGCTC TCCGACCTGT ATCTCTCCTT CCTGGAGCGG
CTCGTCCTCA CCATCGGCGT CGCGGTCAAC ACCATCCAGG CGAACCGGCG TACCGAGGAG
CTGCTGGCCC AGTCGCAGCG GCTGGCCCAC GAGTTGCAGG AGCAGTCGGC CGAACTCCAG
CGTACGAATG CGGAACTGGA GGAGAAGGCG AAGCTCCTCT CCGAGCAGAA GGGCAACATC
GAGACCAAGA ACCGGGAGGT CGAGCTGGCC CGACTGGGCT TGGAGGAGAC GGCGCAGCAG
CTCACCCGCG CCTCGGCGTA CAAGTCGGAG TTCCTGGCCA ACATGAGCCA CGAGCTGCGT
ACGCCGCTGA ACTCGCTGCT GCTGCTGGCC CGGCTGCTGG TCCAGAACCC GGAGCAGAAC
CTCAGCCCGA AGCAGATCGA GTTTGCCCGG ACGATCCACA ACGCCGGAAC GGACCTGCTC
TCGCTGATCG ACGATATTCT TGACCTCTCC AAGATCGAAG CTGGCCGGAC GGACGTCGAG
CCAACCGAGA TTCAGTTCAC CGAGATCCGC GGCTATGTCG AGCAGGCGTT CGCCCCGCAG
GCGGAGGAGA AGGGCCTCGA CTTCGAGGTC CGGATCAGTC CGGAGCTGCC GAAGGAGATC
GTCACCGACG TGCAGCTGCT GCAGCAGATC CTGCGGAACC TGCTTTCCAA CGCGATGAAG
TTCACCGACG CCGGGGCGGT GCGGTTGGGG ATCGCCCCCG CGTCGGAGTC GGCTGTCTTC
GACGTGCCCG CGTTGACCAA CGCGCGGCAG GTGGTCGCCT TCACCGTCGT GGACACCGGG
ATCGGCATTT CCGACGACAA GCTGTCGATC ATTTTTGAGG CGTTCCAGCA GGCTGACGGG
ACGACCAGCC GTCGGTACGG GGGGACCGGC CTGGGCCTGT CGATCAGTCG CGACCTGGCC
CGGCTGCTGG GTGGCGCGAT CGGTGTGTCG TCGGTGCCCG GGCAGGGTTC GACCTTCACC
CTCTTCCTTC CCGACGTCCT GGCCCCGGAC GCGGTCGTGG CGCCGGCTCC GCCCTCACCC
GCCCGGGCTG GCCTCCCGTC GTCGCTACTG ATGCCCGCTG TGGAGTTGCT GCCCACCACC
GCCGAGGCGA CGGCGACCCG CCAGCTGTCC GGTGCCACCG TGCTGATCGT GGACGACGAC
GTGCGTACCG TGTTTGCCCT GACCAGCGCC TTGGAGCTAC ACGGGATGAC CGTGCTGTAC
GCGGACAACG GGGCCGACGG CGTACGCCTG CTGGCCGAGC ATCCGGAGGC GGACATCGTG
CTGATGGATG CCATGATCCC GGATCAGGAC GGATACGAGA CGACGCGGCA GATCCGGCGT
AACCACCGCT TCGCCGACCT CCCGATCGTC TTCCTGACCG CGAAGGCGAT GCCCGGTGAC
CGGGAATCCG CGCTCGCGGC CGGGGGTAGC GGATACATCA CCAAACCTGT CGATCTGGAC
GAGTTGATCG AGCTCATCTC GTCCTGGATC AGCGGAGGTC GGAGCGAGGA GAGCCCGTGA
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| Protein sequence | MTTAKQPAAE LSAPDPDAVL IELTEALRRV RQGDLKVRLP HRSGRAGELA DAFNEVVSLQ
ERQHHDLRRI SRIVGRDGRL TERLDDEDLD GSWAEGQQAV NSLIDDLGRP TIEIARVIAA
VAAGDLSQHM ALELDDRPLR GEYLRIGRTV NTVVDQLSSY ADEVTRVARE VGTEGKLGGQ
ADVRGAAGTW KDLIDSVNTM GSNLTAQVRN ISQVSTAVAT GDLGQKITVD AQGEILELKN
TVNTMVDQLS SFADEVTRVA REVGIDGKLG GQAQVRGVSG TWRDLTENVN QLAGNLTSQV
RNISQVSTAV ARGDLGQKIT VDAQGEILEL KNTVNTMVDQ LSSFADEVTR VAREVGTEGK
LGGQAQVKGV SGTWRDLTDN VNSMASNLTS QVRNIASVTT AVARGDLGQK ITVDAQGEIL
ELKNTVNTMV DQLSSFADEV TRVAREVGTE GKLGGQAQVK GVAGTWRDLT ENVNQLASTL
TIQLRAIAEV STSVTRGDLT QQIAVEAQGE VAELTDNINQ MIVTLRETTT VNAEQGWLDS
NLARIGGLLQ GQRDLGEVCR MIMMEVTPLV DAQLGAFFLV DDAGGNFRLR LTASYGYVAR
GQDVTFGPGE GLVGQVALSR RTIRVSGPAE SRLRLRSGLA DTPPADLVVL PVIFEGELLG
VIEFASVTAL SDLYLSFLER LVLTIGVAVN TIQANRRTEE LLAQSQRLAH ELQEQSAELQ
RTNAELEEKA KLLSEQKGNI ETKNREVELA RLGLEETAQQ LTRASAYKSE FLANMSHELR
TPLNSLLLLA RLLVQNPEQN LSPKQIEFAR TIHNAGTDLL SLIDDILDLS KIEAGRTDVE
PTEIQFTEIR GYVEQAFAPQ AEEKGLDFEV RISPELPKEI VTDVQLLQQI LRNLLSNAMK
FTDAGAVRLG IAPASESAVF DVPALTNARQ VVAFTVVDTG IGISDDKLSI IFEAFQQADG
TTSRRYGGTG LGLSISRDLA RLLGGAIGVS SVPGQGSTFT LFLPDVLAPD AVVAPAPPSP
ARAGLPSSLL MPAVELLPTT AEATATRQLS GATVLIVDDD VRTVFALTSA LELHGMTVLY
ADNGADGVRL LAEHPEADIV LMDAMIPDQD GYETTRQIRR NHRFADLPIV FLTAKAMPGD
RESALAAGGS GYITKPVDLD ELIELISSWI SGGRSEESP
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