Gene Strop_4101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4101 
Symbol 
ID5060583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4661556 
End bp4661879 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content65% 
IMG OID640476362 
Productanti-anti-sigma factor 
Protein accessionYP_001160909 
Protein GI145596612 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.642799 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTCGTG CCGAACTGTC CATCACGCTA CACCGGTTGG GGGACGAGGT TGTTCTTCGC 
CTCGCCGGCG AGATCGACAT GCTGACGGCC ACCCAGCTCT CGACCGTTGT CAACGAGGTG
TTGGCCGAAC CGCCCCCGCG GATCGTGCTG GACCTGGCGG GCGTCACCTT CTGCGACTCG
CAGGGTCTGG GCACGCTGGT CGTGCTCAGC CGCAAGACCA GCCACTCCCA GAGCCTGCTG
GTCCTCACCA ACGTGGCCGA CTTCCTGCTC CGCGTCCTCG ACATCACGGG CCTACGTAGT
GCCCTGATGA TTCGCGACGA CTGA
 
Protein sequence
MGRAELSITL HRLGDEVVLR LAGEIDMLTA TQLSTVVNEV LAEPPPRIVL DLAGVTFCDS 
QGLGTLVVLS RKTSHSQSLL VLTNVADFLL RVLDITGLRS ALMIRDD