| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4094 |
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| Symbol | |
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| ID | 5060576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4653843 |
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| End bp | 4655303 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640476355 |
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| Product | UbiD family decarboxylase |
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| Protein accession | YP_001160902 |
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| Protein GI | 145596605 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.576442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.345928 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCTC GTGGCTTTCC GTACTCTGAT CTGAAGGACT TCCTGGCGGC GCTGGAGCGC
GCGGGTGAGC TGCGGCGGGT GGACGTCCCG GTGGATCCGA CGCTGGAGTT GGCCGAGGTC
GTCACCCGAA CGGTCCGCGC CGGCGGCCCG GCGCTGGTCT TCGAGCGGCC CACCCGCGGC
GAGATGCCGG TGGCGATCAA CCTGTTTGGC ACCGAGAAGC GGATGGCGAT GGCGCTCGGC
GTCGAGTCGC TGGACGAGAT CGGCGCGCGG ATCGGCGCGT TGATCCGGCC GGAGTTGCCG
GTCGGCTGGT CCGGCATCCG CGAGGGCCTC GGCAAGGTCA TGCAGCTCAA GTCGGTGCCG
CCACGCAAGG TGAAGACCGC GCCCTGCCAG CAGGTGGTGT ACCGGGGCGA CGACGTCGAC
CTGACCCGCC TGCCCGGCCT GCAGGTGTGG CCCGGTGACG GCGGCGTCTT CCACAACTAC
GGGTTGACCC ACACCAAGCA TCCCGAGACC GGCGCGCGCA ACCTCGGCCT CTACCGGCTT
CAGCAGCACA GTCGGAACAC GCTGGGCATG CACTGGCAGA TCCACAAGGA CTCCACCGCC
CATCACGCGG TCGCCGAGCG GCTCGGCCAG CGGCTGCCGG TGGCCATCGC GATCGGCTGC
GACCCGGTGA TCTCGTACGC CGCGAGCGCC CCACTTCCCG GCGACATCGA CGAATACCTG
TTCGCGGGTT TCCTGCGCGG TGAACGGGTC GAGATGGTCG ACTGCCTGAC CGTTCCGCTC
CAGGTGCCGG CGCACGCCCA GGTGGTGCTC GAGGGGTACC TCGAGCCCGG CGAGCGGTTG
CCCGAGGGGC CGTTCGGTGA TCACACCGGC TACTACACGC CGATCGAGCC GTTCCCGGTT
CTGCACGTCG AGACGATGAC CATGCAGCGC AACCCGGTCT ACCACTCGAT CATCACCTCG
AAGCCGCCGC AGGAGGACCA TGGCCTGGGT AAGGCCACCG AGCGGATCTT CCAGCCGCTG
CTGAAGCTAC TCATCCCGGA CATCGTCGAC TACGACCTGC CGGCCGCCGG GGTCTTCCAC
AACTGCGCGA TCGTGTCGAT TCGCAAGCGC TACCCAAAGC ACGCGCAGAA GGTCATGAGT
GCGATCTGGG GCGCGCACCT GATGTCGATG ACCAAGCTGA TCGTGATCGT GGACGAGGAC
TGCGACGTGC ACGACTACAA CGCGGTTGCC TTCCGGGCGT TCGGCAACGT GGACTACGCC
CGGGACCTGC TGCTCACCGA AGGGCCGGTG GACCACCTGG ACCACGCCTC GTACCAGCAG
TTCTGGGGCG GTAAGGCCGG CGTCGACGCC ACCCGCAAGC TCCCGGGGGA GGGCTACACC
CGGGGCTGGC CCGAGGAGTT GACCATGGCG CCCGAGGTGG TGTCGTTGGT CGACAAGCGC
TGGAAGGAGT ACGGCATCTG A
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| Protein sequence | MAARGFPYSD LKDFLAALER AGELRRVDVP VDPTLELAEV VTRTVRAGGP ALVFERPTRG
EMPVAINLFG TEKRMAMALG VESLDEIGAR IGALIRPELP VGWSGIREGL GKVMQLKSVP
PRKVKTAPCQ QVVYRGDDVD LTRLPGLQVW PGDGGVFHNY GLTHTKHPET GARNLGLYRL
QQHSRNTLGM HWQIHKDSTA HHAVAERLGQ RLPVAIAIGC DPVISYAASA PLPGDIDEYL
FAGFLRGERV EMVDCLTVPL QVPAHAQVVL EGYLEPGERL PEGPFGDHTG YYTPIEPFPV
LHVETMTMQR NPVYHSIITS KPPQEDHGLG KATERIFQPL LKLLIPDIVD YDLPAAGVFH
NCAIVSIRKR YPKHAQKVMS AIWGAHLMSM TKLIVIVDED CDVHDYNAVA FRAFGNVDYA
RDLLLTEGPV DHLDHASYQQ FWGGKAGVDA TRKLPGEGYT RGWPEELTMA PEVVSLVDKR
WKEYGI
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