| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4063 |
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| Symbol | |
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| ID | 5060545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4622267 |
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| End bp | 4623004 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640476324 |
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| Product | NADH dehydrogenase subunit C |
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| Protein accession | YP_001160871 |
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| Protein GI | 145596574 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.109975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGCAC CCCAGGACAG GACGGACGAC GGCGGTGTGC CGGTACCGGT GACCCCGGCT
GGGGCCACCG GTGGCGCTCC GGCTGAGCTG CCCCCGTCGA GCCCCGCCGG GCGCGGAATG
TTCGGTGACC AGGGCACCGG CGATGTATCC GGCTACGGCG GGTTGGTCCG CCCACAACGG
TCTATCGAGG CGGCCACGCG GCCGTACGGT GGCTACTTCG ACGAGGTCGC CGACGCGTTG
GAGGAGGCGT ACCCGGCCTT CGGCGAGGCG ATCGAGAAGG TCGTGGTCGA CCGGGGTGAG
CTGACCCTGC ACATCCGCCC GGAGCGGATC GCCGAGGTCT GCCAGGTGAT GCGGGACGAC
CTCTCGCTTC GGTTCGAGCT CTGTTCGTCG GTGTCCGGGG TGGACTACCT CGGCGCCGAT
GCCTGCCGGT TGCACGTGGT CTACCAGCTG ACCTCGATGA CCTACCGGCG TCAGGTCCGG
CTGGAGGCGG CGGTCTCCGC CGAGAACCCG CACCTGCCCA GCGTGACCAG TGTCTACCCG
ACCGCCGACT GGCAGGAGCG GGAGACCTAC GACATGTTCG GCGTCATCTT CGACGGCCAC
CCCGGCCTGA CCCGGATCCT CATGCCGGAC GACTGGGAGG GCCACCCACA GCGCAAGGAC
TATCCGCTGG GTGGCGTGCC AGTCGAGTAC AAGGGCGCCG AGATCCCACC GCCGGACCGC
CGGAGGTCGT ACCAGTGA
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| Protein sequence | MSAPQDRTDD GGVPVPVTPA GATGGAPAEL PPSSPAGRGM FGDQGTGDVS GYGGLVRPQR
SIEAATRPYG GYFDEVADAL EEAYPAFGEA IEKVVVDRGE LTLHIRPERI AEVCQVMRDD
LSLRFELCSS VSGVDYLGAD ACRLHVVYQL TSMTYRRQVR LEAAVSAENP HLPSVTSVYP
TADWQERETY DMFGVIFDGH PGLTRILMPD DWEGHPQRKD YPLGGVPVEY KGAEIPPPDR
RRSYQ
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