| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4060 |
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| Symbol | |
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| ID | 5060542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4618563 |
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| End bp | 4619894 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640476321 |
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| Product | NADH-quinone oxidoreductase, F subunit |
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| Protein accession | YP_001160868 |
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| Protein GI | 145596571 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.306589 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACCC CTCGGCCGGA GACGCTGGCC AAGCTCACGC CGGTGCTCAC CAAGCGCTGG
CTGTCGCCGG ACGCCTGGCG GATCGGCACC TATGAGCGGC TGGACGGGTA CGCCGCGTTG
CGCAAGGCCA TGCAGGCCCA CCCGGACGAC CTGATCCAGC TGGTCAAGGA CTCTGGGCTG
CGCGGCCGTG GCGGCGCGGG CTTCCCGACC GGTCTCAAGT GGGGGTTCAT CCCGCAGGAG
CCGGACGGCA AGGCCCCGAC GCGACCGCAC TACCTGGTGG TCAACGCGGA CGAGGGCGAG
CCGGGCACCT GCAAGGACCT GCCGCTGATG ACGCACGACC CGCACTCCCT GATCGAGGGT
GTGATCATCG CGTCGTACGC GATCCGGGCC AACCGCGCCT ACATCTACAT CCGCGGCGAG
GCGGTACACG CCGCCCGCCG GCTGCGCCAT GCGGTGCAGG AGGCGTACGC CCGGAACTAC
CTCGGGAAGA ACATCCTCGG CAGCGGCTTC GACCTGGATC TGGTGGTGCA CTCGGGGGCC
GGGGCGTACA TCTGCGGTGA GGAGACCGCG CTCCTGGACT CGCTGGAGGG GTTCCGCGGC
CAGCCCCGGC TGCGCCCGCC GTTCCCGGCG ACCCATGGTC TGTACGCCAG CCCGACAGTG
GTGAACAACG TCGGCACCAT CGCCTCGGTC CCGTACCTCG TCCTGGGTGG TGCCGCGTGG
TGGCGGACCA TGGGCACGGA GAAGTCCTCC GGGCCGATGA TCTACTCGCT CTCCGGCCGG
GTCGTGAACC CGGGCCAGTA CGAGTGCTCG ATGGGTGTCA CGCTTCGCGA GCTGATCGAG
CTGGCCGGCG GTATGCGGCC GGGACACTCC CTGCGGTTCT GGACGCCGGG CGGCTCGTCG
ACGCCGCTGC TGACCGCCGA TCACCTGGAT GTGCCGCTGG ACTTCGAGGG GGTGGCGGCG
GCGGGGTCGA TTCTCGGCAC CACCGCGACG CAGATCTTCT CCGACCAGGA CTGCCCGGTC
TACGCGACGT ACCGGTGGCT GGAGTTCTAC CACCACGAGT CGTGTGGCAA GTGCACCCCG
TGCCGGGAGG GTAACTACTG GATGGTCCGT GTCTACCGCC GGATCCTCTC CGGTCAGGGC
ACCCAGGAGG ACCTGGACAC ACTCCTGGAC ACCTGCGACA ACATTCTCGG CCGCTCGTTC
TGCGGCCTCG GTGACGGCGC CACCAGCCCG GTGACCTCCT CGCTGAAGTA CTTCAAGCAG
GACTACCTCG ACTACGTCGA GGGCCGGACC GCGCCGAAGC TCTCCGACAA GCAGCTGGTG
GGGGCCCACT GA
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| Protein sequence | MTTPRPETLA KLTPVLTKRW LSPDAWRIGT YERLDGYAAL RKAMQAHPDD LIQLVKDSGL
RGRGGAGFPT GLKWGFIPQE PDGKAPTRPH YLVVNADEGE PGTCKDLPLM THDPHSLIEG
VIIASYAIRA NRAYIYIRGE AVHAARRLRH AVQEAYARNY LGKNILGSGF DLDLVVHSGA
GAYICGEETA LLDSLEGFRG QPRLRPPFPA THGLYASPTV VNNVGTIASV PYLVLGGAAW
WRTMGTEKSS GPMIYSLSGR VVNPGQYECS MGVTLRELIE LAGGMRPGHS LRFWTPGGSS
TPLLTADHLD VPLDFEGVAA AGSILGTTAT QIFSDQDCPV YATYRWLEFY HHESCGKCTP
CREGNYWMVR VYRRILSGQG TQEDLDTLLD TCDNILGRSF CGLGDGATSP VTSSLKYFKQ
DYLDYVEGRT APKLSDKQLV GAH
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