| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4056 |
|---|
| Symbol | |
|---|
| ID | 5060538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4613235 |
|---|
| End bp | 4614005 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640476317 |
|---|
| Product | NADH dehydrogenase subunit J |
|---|
| Protein accession | YP_001160864 |
|---|
| Protein GI | 145596567 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.814675 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.545712 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGC AGACGGTGCT CGCCGCGGCG GGTTCGGTAT CCGGAGGTGA GGCGGTCACC
TTCTGGATCC TCGCCCCGCT GGCGCTGATC GGCGCGATCG GCATGGTCGC TGCCCGTAAC
GCGGTGCACT CGGCGCTGAT GCTGGTCCTG ACGATGCTCT GCCTGGGCAT CTTCTACGTG
CTCCAGGCCG GGCCGTTCAT CGGCGTGGTG CAGATCATCG TCTACACCGG CGCGATCATG
ATGTTGTTCC TCTTCGTGCT GATGCTGGTG GGCCGCGGCG CCTCGGATTC GTTGATCGAG
ACGCTGCGCG GCCAGCGGAT CGCGGCGCTC GTCCTCGGCG TCGGGTTCGC CGGACTCGTC
GGTACCGGCA TGTACCGGGC GCTGGCCGGT AGCACCGCCG TCGGACTCAC CACGGCTAAC
GCCGAGGGCA ACGTGCAGGG CATCGCCCGG CTGCTGTTCA CCAAGTACGT CCTCGCCTTC
GAGCTGACCT CGGCGCTGCT GATCACGGCG GCGGTCGGTG CGATGGTGCT GGCGCACATC
GAGCGGCGCC GGGAGGACCG GATGGATCAG GTCGCCACCA TGAAGGCGCG GTTCCGCCCC
GGTAACTACC CCGGCCCGAA GCCGGGCCCG GGCGTGTTCG CCACCTCGTC GTCGGTCGCC
ACGCCGGCCC GCCTGCCCGA CGGCCGGCTG GCCGAGCAGA GCACCCCGGA AATCCTGCCG
GTCCGTGAGC TGACCGTCGA GGACACGACG TTGAAGGGGA CCGAAAAGTG A
|
|---|
| Protein sequence | MTTQTVLAAA GSVSGGEAVT FWILAPLALI GAIGMVAARN AVHSALMLVL TMLCLGIFYV
LQAGPFIGVV QIIVYTGAIM MLFLFVLMLV GRGASDSLIE TLRGQRIAAL VLGVGFAGLV
GTGMYRALAG STAVGLTTAN AEGNVQGIAR LLFTKYVLAF ELTSALLITA AVGAMVLAHI
ERRREDRMDQ VATMKARFRP GNYPGPKPGP GVFATSSSVA TPARLPDGRL AEQSTPEILP
VRELTVEDTT LKGTEK
|
|---|
| |