| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4054 |
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| Symbol | |
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| ID | 5060536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4610949 |
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| End bp | 4612907 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640476315 |
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| Product | NADH dehydrogenase subunit L |
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| Protein accession | YP_001160862 |
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| Protein GI | 145596565 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.431336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATTC TGGCGAAAGC CCCCGTCGAG CCGGTGGGCA CCGTCACGTA CGGGACCGCC
GACGGGTTGC TCGGCAGTGT CTGGCTGCTG GTGGCGATCC CACTGGTCAG CGCGGCGATC
CTGCTGCTAC TCGGCCGTCG GGCGGACCGG TGGGGGCACT GGCTGGGTGT CGCGTCGGTC
GGTGTCGCGT TCCTGCTTGG CCTGACCTAC TTCTTCCAGC TACGAGGTCT GGAGAACCGG
TCCGTTGAGC TGAGCCTCTG GGACTTCATC GCGGTCGGCG ACCTGCGAGT GGACTTCGGC
CTGCTCTTCG ACCCGCTGGC GGCGGTTTTC GTACTGCTGA TCACCGGGGT GGGCTTCCTG
ATCCACCTGT ACGCGGTGGA GTACATGGCC CACGACCCAG GGCGTCGGCG CTTCTTCGGG
TACTTCAACC TGTTCGTCGC CGCCATGCTC CTGCTGGTGC TCGGCAACAA CTACGTGATG
CTCTACTTCG GCTGGGAGGG CGTCGGGCTG GCGTCGTACC TGCTGATCTC CTTCTGGTAC
GAGCGGCCCG CCGCCGCCAC CGCCGGTAAG AAGGCGTTCC TGATGAACCG GGTCGGCGAC
GCCGGCCTGG CGATCGGCAT CTTCATCATG TTCGCCACCC TGGGCACCAC ACAGTACGAC
GAGGTCTTCA CCGGTGTCGG GTCGCTGACC GCCACCACGG TCCTGCTACT CGGCCTGCTC
CTGCTGCTCG GCGCGGCCGG TAAGTCGGGC CAGTTTCCGC TGCAGGCGTG GCTTCCGGAC
GCGATGGAGG GCCCGACCCC GGTCTCCGCG CTCATCCACG CGGCCACCAT GGTCACCGCG
GGTGTGTACC TGATTGCCCG CTCCAACCCG ATCTTCTCGG CGAACTCGAC GCTGCAACTG
GTCGTGGTGA GCGTCGGCGT GCTGACGTTG CTGCTCGGCG CCATCATCGG CATGGCGAAG
GACGACATCA AGCGGGTGCT CGCCTGGTCA ACGGTGAGCC AGATCGGTTA CATGTTCCTC
GGCGTCGGCC TCGGTGGTGC GGCGTACGCG CTGGCTATCG TGCATCTGTT GGCGCACGGC
TTCTTCAAGG CCAACATGTT CCTGGGCGCC GGCTCGGTGA TGCATGGGAT GAAGGACCAG
GTCGACATCC GGCGCTTCGG TGGGCTGGCG AAGTACATGA AGGTCACCTG GCTGACCTTC
ATGGCCGGCT GGTTGGCGAT CATCGGCCTG CCGCCGTTCT CCGGCTTCTT CTCCAAGGAG
CCGATCATCG TGGCCGCGTT CGAGCGGGAC GACTGGACGG CCTGGCTGTT CGGCCTGGCC
GCCCTGCTCG GTGCCGGGCT GACCGCGTTC TACATGACTC GGCTGTTCGT GCTCACCTTC
CACGGTCCGG CTCGCTGGAC CGAGGAGATC GACCACCCGC ACGAGTCACC GAAGCTGATG
ACGATCCCGC TGATCCTGCT CGCGGTCGGC TCGATCGGCG CCGGAGCCCT GATGGTCGGG
CCCGTCCCCG AGTGGCTGGA GGCGACCGCC GGACTCGGTG GTGGCTCGGA GGCCGCGCAC
GAGACGGTGC TCTCGCACCT CGCCATCACG ATCCTGTCGA TCGCGGTAAC CGTGATCGGC
GCCGGGCTCG CCTGGTTCCT GTTCCGGACC GGCACGGCCA CCGAGCCGCA GCCGGCAGGG
GTGCTGGTCA CCGCCGCCCG GAAGAACCTC TACACCGACG CCGTCAACGA GGCGGTGTTC
GAGAAGCCGG GCATCTTCCT CACCCGGGCG CTGGTCTACC TGGACAACCG GGGCATCGAC
GGGCTGGTCA ACGCCCTCGC CGCCGGGGTC GGCGGCGGCT CGGGCCGGCT CCGGCGGTTG
CAGACCGGCT TCGTCCGGTC GTACGCCACC TCGATCCTGG CCGGTGCCTT GCTGGTGGTG
GCGGCCTTCC TGGCTATCGA GGCGGGGTGG CTGGTGTGA
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| Protein sequence | MEILAKAPVE PVGTVTYGTA DGLLGSVWLL VAIPLVSAAI LLLLGRRADR WGHWLGVASV
GVAFLLGLTY FFQLRGLENR SVELSLWDFI AVGDLRVDFG LLFDPLAAVF VLLITGVGFL
IHLYAVEYMA HDPGRRRFFG YFNLFVAAML LLVLGNNYVM LYFGWEGVGL ASYLLISFWY
ERPAAATAGK KAFLMNRVGD AGLAIGIFIM FATLGTTQYD EVFTGVGSLT ATTVLLLGLL
LLLGAAGKSG QFPLQAWLPD AMEGPTPVSA LIHAATMVTA GVYLIARSNP IFSANSTLQL
VVVSVGVLTL LLGAIIGMAK DDIKRVLAWS TVSQIGYMFL GVGLGGAAYA LAIVHLLAHG
FFKANMFLGA GSVMHGMKDQ VDIRRFGGLA KYMKVTWLTF MAGWLAIIGL PPFSGFFSKE
PIIVAAFERD DWTAWLFGLA ALLGAGLTAF YMTRLFVLTF HGPARWTEEI DHPHESPKLM
TIPLILLAVG SIGAGALMVG PVPEWLEATA GLGGGSEAAH ETVLSHLAIT ILSIAVTVIG
AGLAWFLFRT GTATEPQPAG VLVTAARKNL YTDAVNEAVF EKPGIFLTRA LVYLDNRGID
GLVNALAAGV GGGSGRLRRL QTGFVRSYAT SILAGALLVV AAFLAIEAGW LV
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